Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 Y_RNA.126-201ENST00000363382 111 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 SNORD113.2-201ENST00000364166 89 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 Y_RNA.359-201ENST00000365498 102 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 MT-TP-201ENST00000387461 68 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 ELOCP19-201ENST00000411919 318 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC013404.1-201ENST00000413068 249 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 NRBF2P2-201ENST00000413087 861 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC114755.2-201ENST00000413520 361 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 RPL7P44-201ENST00000424827 742 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 HSPE1P16-201ENST00000426640 348 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 MTCO1P3-201ENST00000429327 192 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC241584.1-201ENST00000438469 1241 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 COX6CP2-201ENST00000444980 225 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC005002.1-201ENST00000447458 540 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 NUTF2P7-201ENST00000453086 375 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 ZNF114P1-201ENST00000453500 292 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 SUMO2P2-201ENST00000456482 255 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 RPS5P7-201ENST00000456664 608 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 TPT1P7-201ENST00000458300 517 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC010285.3-201ENST00000511668 676 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC083923.1-201ENST00000523708 376 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC007954.1-201ENST00000554198 494 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC068135.2-201ENST00000569293 1028 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC090186.1-201ENST00000605991 572 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AL357078.3-201ENST00000607528 618 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC019131.2-201ENST00000609071 870 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC010678.1-201ENST00000614118 713 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC124312.6-202ENST00000623624 418 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC068724.3-201ENST00000625906 87 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.07□□□□□ -1.6
SLC44A3Q8N4M1 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 MUC2-202ENST00000613187 4845 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 NSRP1P1-201ENST00000444067 1693 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC011477.1-204ENST00000623416 1325 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 RNU6-867P-201ENST00000364956 107 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 MIR129-1-201ENST00000384972 72 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AL390316.1-201ENST00000406279 553 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC234781.4-201ENST00000419384 244 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 GNG5P5-201ENST00000420444 220 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 Z99497.1-201ENST00000421282 135 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC093084.1-201ENST00000424233 687 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC234064.1-201ENST00000436312 247 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC016831.4-201ENST00000438302 307 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 BX842559.2-201ENST00000451418 605 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 KATNBL1P6-201ENST00000453433 915 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 HMGB1P4-201ENST00000455362 567 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 RPL9P33-201ENST00000484311 566 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 NCOR1P1-202ENST00000486162 291 ntBASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.06□□□□□ -1.6
SLC44A3Q8N4M1 SCARNA22-201ENST00000503991 125 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms