Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NIPAL3Q6P499 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 Z82217.1-201ENST00000625157 8149 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 NMD3P1-201ENST00000439704 1488 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC016716.1-201ENST00000265882 708 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 OR4K17-201ENST00000315543 1032 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 SNORA56-201ENST00000383966 129 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 RNU6-481P-201ENST00000384194 107 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AL583835.1-201ENST00000399570 407 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 MIR1179-201ENST00000408703 91 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 RNU2-72P-201ENST00000411175 163 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 USP9YP19-201ENST00000412165 485 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 RPS6P12-201ENST00000432491 726 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 GSTA7P-201ENST00000438425 448 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AL512326.1-201ENST00000443050 721 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 RN7SL481P-201ENST00000477764 299 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 SETP6-201ENST00000479329 568 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 OR5H3P-201ENST00000502817 919 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 BNIP3P41-201ENST00000503774 571 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC008628.1-201ENST00000508663 265 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 RN7SKP277-201ENST00000516895 283 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 CENPUP2-201ENST00000555897 1186 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AC005972.3-201ENST00000606304 481 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AL512506.1-201ENST00000613918 449 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 MIR8084-201ENST00000614105 89 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 VN1R9P-201ENST00000614184 867 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 AL121890.3-201ENST00000618494 516 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 MIR4496-201ENST00000635896 61 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NIPAL3Q6P499 PNPT1P2-201ENST00000456768 2050 ntBASIC3.82□□□□□ -1.8
NIPAL3Q6P499 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AL158163.1-201ENST00000603915 1649 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 DCAF13P1-201ENST00000495256 1330 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 RNU6-356P-201ENST00000384140 107 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 RNA5SP36-201ENST00000410197 133 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 RNA5SP239-201ENST00000410218 129 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 RNU6-272P-201ENST00000411028 104 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 NRBF2P2-201ENST00000413087 861 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AL807761.1-201ENST00000417622 171 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 MFSD13B-201ENST00000420133 1290 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AL592293.2-201ENST00000422292 996 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AC073143.1-201ENST00000436316 395 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 MTND1P33-201ENST00000446251 917 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 RN7SL303P-201ENST00000469773 251 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AC015724.1-201ENST00000478577 156 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 HPRT1P2-201ENST00000505250 544 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AC025674.1-201ENST00000507074 324 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 AP003049.1-201ENST00000529418 457 ntBASIC3.81□□□□□ -1.8
NIPAL3Q6P499 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.81□□□□□ -1.8
NIPAL3Q6P499 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms