Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 OR4A15-201ENST00000314706 1035 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 Y_RNA.311-201ENST00000365068 96 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 SNORD116-8-201ENST00000384365 95 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 FABP12P1-201ENST00000401911 322 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AL080315.1-201ENST00000406055 466 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 B3GNT2P1-201ENST00000434960 952 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 UBE2D3P1-201ENST00000436669 444 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 YWHAZP7-201ENST00000436906 631 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC105402.2-201ENST00000438503 358 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AL133217.1-201ENST00000450980 425 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 CYCSP28-201ENST00000534284 321 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC007225.2-201ENST00000562529 256 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 RN7SL176P-201ENST00000580352 264 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 MIR1269B-201ENST00000580405 75 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 VN1R82P-201ENST00000601481 356 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AP000894.4-201ENST00000610185 483 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC126915.2-201ENST00000610957 190 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AL359535.1-201ENST00000612100 1087 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AL512624.1-201ENST00000613638 469 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC005086.4-201ENST00000623065 213 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC078883.4-201ENST00000623218 367 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AC098679.5-201ENST00000624394 571 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 AL353662.3-201ENST00000625131 237 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 THAP12P4-201ENST00000528321 2266 ntBASIC4.55□□□□□ -1.68
RUNDC3AQ59EK9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 ZNF542P-204ENST00000482727 1305 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 SNURFL-201ENST00000309296 343 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 RNU6-921P-201ENST00000384361 107 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 MIR195-201ENST00000385194 87 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AL589647.1-201ENST00000402485 466 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 LAP3P1-201ENST00000403648 294 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AL121834.1-202ENST00000404494 277 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AL356131.1-201ENST00000405826 414 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 RPL7P57-201ENST00000423238 740 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 RPL31P54-201ENST00000429803 370 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 RHOT1P3-201ENST00000436571 331 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 MTND5P2-201ENST00000442927 1142 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 PTMAP3-201ENST00000447474 330 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AC104651.2-201ENST00000447549 528 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 AP000893.1-201ENST00000474462 794 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 DEFB109F-201ENST00000491870 277 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 RPS4XP18-201ENST00000495480 763 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 HMGB3P13-201ENST00000511263 607 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 MTCO1P30-201ENST00000515244 580 ntBASIC4.54□□□□□ -1.68
RUNDC3AQ59EK9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms