Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AC009269.6-201ENST00000621778 588 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.05□□□□□ -1.76
SIX1Q15475 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.05□□□□□ -1.76
SIX1Q15475 AC119674.1-212ENST00000641155 993 ntBASIC4.05□□□□□ -1.76
SIX1Q15475 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIX1Q15475 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 MFSD8-220ENST00000641243 1422 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX1Q15475 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX1Q15475 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 RNU6-1005P-201ENST00000384519 107 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 GAPDHP49-201ENST00000421421 961 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 OR6K4P-201ENST00000423179 955 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX1Q15475 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX1Q15475 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SIX1Q15475 AC084198.1-201ENST00000477747 402 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 RPL21P47-201ENST00000483696 477 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AC105137.1-201ENST00000484355 562 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 TRBV12-2-201ENST00000489763 344 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 NARSP2-201ENST00000518524 679 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AP000916.1-201ENST00000533869 835 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.04□□□□□ -1.76
SIX1Q15475 AC068620.3-201ENST00000602749 560 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AL590392.1-201ENST00000604960 446 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AC091167.4-201ENST00000605079 184 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AC026368.1-201ENST00000614934 690 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 AP004607.9-201ENST00000618202 316 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 AC079684.1-201ENST00000621405 437 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AC093875.1-201ENST00000623688 504 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 AL356121.2-201ENST00000624715 780 ntBASIC4.04□□□□□ -1.76
SIX1Q15475 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX1Q15475 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SIX1Q15475 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SIX1Q15475 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.04□□□□□ -1.76
SIX1Q15475 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX1Q15475 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX1Q15475 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SIX1Q15475 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX1Q15475 AL031985.3-201ENST00000565390 2449 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX1Q15475 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX1Q15475 RN7SKP227-201ENST00000364445 330 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SIX1Q15475 RNU6-354P-201ENST00000383862 107 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 RNU6-610P-201ENST00000384264 107 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 RNU6-532P-201ENST00000384318 107 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 RNU6-244P-201ENST00000391028 104 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 RPL22P22-201ENST00000395439 379 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX1Q15475 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX1Q15475 RSL24D1P6-201ENST00000426934 401 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 MTCO1P43-201ENST00000431831 488 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX1Q15475 AC006994.1-201ENST00000438212 839 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 CACYBPP1-201ENST00000438592 684 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX1Q15475 CCDC75P1-201ENST00000469247 791 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX1Q15475 HAUS1P1-201ENST00000505275 832 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 VWA8P1-201ENST00000510889 176 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.03□□□□□ -1.76
SIX1Q15475 RNU6-1004P-201ENST00000516584 111 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 RNA5SP179-201ENST00000517284 121 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.03□□□□□ -1.76
SIX1Q15475 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX1Q15475 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX1Q15475 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.03□□□□□ -1.76
SIX1Q15475 KPNA2P3-201ENST00000584190 848 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.03□□□□□ -1.76
SIX1Q15475 AC133552.5-201ENST00000604266 540 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 AL049844.2-201ENST00000604280 628 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 BRDTP1-201ENST00000605735 677 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 AC026790.2-201ENST00000606282 430 ntBASIC4.03□□□□□ -1.76
SIX1Q15475 AL008729.2-201ENST00000606393 473 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms