Protein–RNA interactions for Protein: Q147U7

SMCO1, Single-pass membrane and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1Q147U7 TRIM60P18-201ENST00000441518 828 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 RPS27P29-201ENST00000463110 252 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC111000.3-201ENST00000508057 576 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 TXNP6-201ENST00000510190 310 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 SOD1P3-201ENST00000518682 454 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC091516.1-201ENST00000549191 703 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 SYF2P1-201ENST00000550658 413 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC087888.1-201ENST00000550884 1254 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 MIR4480-201ENST00000582492 71 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC010928.3-201ENST00000587712 541 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 KLKP1-201ENST00000595979 403 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC005191.1-201ENST00000603950 358 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC009948.4-201ENST00000604692 675 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 MIR6729-201ENST00000618194 65 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
SMCO1Q147U7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMCO1Q147U7 AL157700.1-201ENST00000561973 1432 ntBASIC3.17□□□□□ -1.9
SMCO1Q147U7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMCO1Q147U7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMCO1Q147U7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMCO1Q147U7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMCO1Q147U7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMCO1Q147U7 RNA5SP443-201ENST00000363083 132 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 RNA5SP399-201ENST00000364003 117 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 AL161909.1-201ENST00000397390 712 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 AL590806.1-201ENST00000415818 853 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 AC006989.1-201ENST00000427212 131 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 MOB1AP1-201ENST00000430903 535 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 Z95152.1-201ENST00000453556 656 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 snoU13.1-201ENST00000459157 104 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 RPL21P11-201ENST00000461458 483 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 RPS27AP1-201ENST00000475545 471 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMCO1Q147U7 CYCSP29-201ENST00000533731 318 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 MIR4738-201ENST00000579134 87 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 NF1P5-201ENST00000588287 448 ntBASIC3.16□□□□□ -1.9
SMCO1Q147U7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.16□□□□□ -1.9
SMCO1Q147U7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMCO1Q147U7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
SMCO1Q147U7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMCO1Q147U7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMCO1Q147U7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 MIR550A3-201ENST00000390735 95 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 RPS26P8-201ENST00000393490 348 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 SNORA11.3-201ENST00000408471 128 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC108032.1-201ENST00000416706 207 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 RPL17P36-201ENST00000420302 549 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMCO1Q147U7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 NPM1P17-201ENST00000479221 602 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 RN7SKP289-201ENST00000517244 295 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC008489.1-201ENST00000524271 483 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMCO1Q147U7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 TGIF1P1-201ENST00000558095 802 ntBASIC3.15□□□□□ -1.91
SMCO1Q147U7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.15□□□□□ -1.91
SMCO1Q147U7 AL137849.1-201ENST00000604767 169 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms