Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H3AP68431 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 Y_RNA.625-201ENST00000411256 107 ntBASIC3.3□□□□□ -1.88
HIST1H3AP68431 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 MTCO3P20-201ENST00000454926 688 ntBASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC010460.1-201ENST00000507087 466 ntBASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 CYCSP30-201ENST00000546447 172 ntBASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC006960.3-201ENST00000561845 705 ntBASIC3.3□□□□□ -1.88
HIST1H3AP68431 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC022884.3-201ENST00000579571 248 ntBASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC067852.4-201ENST00000590314 478 ntBASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 RMST_5.1-201ENST00000618704 126 ntBASIC3.3□□□□□ -1.88
HIST1H3AP68431 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H3AP68431 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H3AP68431 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H3AP68431 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.3□□□□□ -1.88
HIST1H3AP68431 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HIST1H3AP68431 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 DCAF13P3-201ENST00000561147 1334 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AL118496.1-201ENST00000440201 1812 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 RNA5SP424-201ENST00000390988 115 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC240504.1-201ENST00000395709 845 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 SKP1P1-201ENST00000438081 489 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 SNORD108-201ENST00000459332 71 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 RN7SL385P-201ENST00000468873 276 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC022034.3-201ENST00000471393 478 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 RN7SL323P-201ENST00000494712 295 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 RNU6-1231P-201ENST00000517185 103 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 MIR2116-201ENST00000517221 80 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC007224.1-201ENST00000564410 144 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AP005901.4-201ENST00000577336 569 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC053481.4-201ENST00000583164 216 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AL391834.1-201ENST00000609609 560 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 ZYXP1-201ENST00000617638 118 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 FP236240.3-201ENST00000623061 327 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC020763.5-201ENST00000623298 430 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC004943.3-201ENST00000624116 600 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 AP003072.4-201ENST00000624580 310 ntBASIC3.29□□□□□ -1.88
HIST1H3AP68431 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
HIST1H3AP68431 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HIST1H3AP68431 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H3AP68431 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H3AP68431 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H3AP68431 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HIST1H3AP68431 RNU6-673P-201ENST00000365084 104 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 SOD2P1-201ENST00000396543 562 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC017083.1-201ENST00000428093 483 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 UBDP1-202ENST00000457888 382 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC007537.2-201ENST00000472093 511 ntBASIC3.28□□□□□ -1.88
HIST1H3AP68431 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms