Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 OR6C72P-201ENST00000451403 892 ntBASIC4.1□□□□□ -1.75
TPM4P67936 RPL6P9-201ENST00000466502 859 ntBASIC4.1□□□□□ -1.75
TPM4P67936 SEPT7P6-201ENST00000469999 1143 ntBASIC4.1□□□□□ -1.75
TPM4P67936 CYCSP20-201ENST00000473154 315 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AP000893.1-201ENST00000474462 794 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.1□□□□□ -1.75
TPM4P67936 AC023050.1-201ENST00000498198 304 ntBASIC4.1□□□□□ -1.75
TPM4P67936 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.1□□□□□ -1.75
TPM4P67936 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.1□□□□□ -1.75
TPM4P67936 AC009643.1-201ENST00000532030 391 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM4P67936 AC011477.5-201ENST00000586571 259 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AC067852.4-201ENST00000590314 478 ntBASIC4.1□□□□□ -1.75
TPM4P67936 BNIP3P38-201ENST00000601117 544 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AC015726.1-201ENST00000602353 681 ntBASIC4.1□□□□□ -1.75
TPM4P67936 uc_338.9-201ENST00000617424 182 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AL445567.2-201ENST00000618935 498 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AC004943.3-201ENST00000624116 600 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AC090506.2-201ENST00000624521 419 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AP003072.4-201ENST00000624580 310 ntBASIC4.1□□□□□ -1.75
TPM4P67936 AC092159.4-201ENST00000624944 550 ntBASIC4.1□□□□□ -1.75
TPM4P67936 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.1□□□□□ -1.75
TPM4P67936 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TPM4P67936 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.1□□□□□ -1.75
TPM4P67936 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TPM4P67936 MFSD8-236ENST00000641509 4050 ntBASIC4.1□□□□□ -1.75
TPM4P67936 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TPM4P67936 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TPM4P67936 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
TPM4P67936 SAGE2P-201ENST00000420011 2126 ntBASIC4.09□□□□□ -1.75
TPM4P67936 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TPM4P67936 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TPM4P67936 EI24P2-201ENST00000397776 1076 ntBASIC4.09□□□□□ -1.75
TPM4P67936 MTHFD2P2-201ENST00000407725 247 ntBASIC4.09□□□□□ -1.75
TPM4P67936 AIMP1P1-201ENST00000418670 937 ntBASIC4.09□□□□□ -1.75
TPM4P67936 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM4P67936 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.09□□□□□ -1.75
TPM4P67936 NUTF2P3-201ENST00000448540 384 ntBASIC4.09□□□□□ -1.75
TPM4P67936 AC010655.1-201ENST00000449336 292 ntBASIC4.09□□□□□ -1.75
TPM4P67936 CCRL1P1-201ENST00000449542 1053 ntBASIC4.09□□□□□ -1.75
TPM4P67936 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM4P67936 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM4P67936 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.09□□□□□ -1.75
TPM4P67936 RNU6-319P-201ENST00000516025 108 ntBASIC4.09□□□□□ -1.75
TPM4P67936 RNU2-27P-201ENST00000516185 142 ntBASIC4.09□□□□□ -1.75
TPM4P67936 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM4P67936 AC022790.1-201ENST00000522872 204 ntBASIC4.09□□□□□ -1.75
TPM4P67936 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM4P67936 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TPM4P67936 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.09□□□□□ -1.75
TPM4P67936 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM4P67936 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TPM4P67936 AC120057.2-201ENST00000571520 271 ntBASIC4.09□□□□□ -1.75
TPM4P67936 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM4P67936 AP001180.3-201ENST00000582221 145 ntBASIC4.09□□□□□ -1.75
TPM4P67936 MIR3138-201ENST00000585238 82 ntBASIC4.09□□□□□ -1.75
TPM4P67936 AL049634.3-201ENST00000604968 457 ntBASIC4.09□□□□□ -1.75
TPM4P67936 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM4P67936 AC073073.2-201ENST00000609827 2578 ntBASIC4.09□□□□□ -1.75
TPM4P67936 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM4P67936 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM4P67936 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TPM4P67936 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.08□□□□□ -1.76
TPM4P67936 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.08□□□□□ -1.76
TPM4P67936 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.08□□□□□ -1.76
TPM4P67936 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TPM4P67936 AC240504.1-201ENST00000395709 845 ntBASIC4.08□□□□□ -1.76
TPM4P67936 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TPM4P67936 RCC2P2-201ENST00000422174 918 ntBASIC4.08□□□□□ -1.76
TPM4P67936 AL049610.1-201ENST00000423374 372 ntBASIC4.08□□□□□ -1.76
TPM4P67936 ARF4P2-201ENST00000430209 526 ntBASIC4.08□□□□□ -1.76
TPM4P67936 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.08□□□□□ -1.76
TPM4P67936 USP9YP7-201ENST00000436723 430 ntBASIC4.08□□□□□ -1.76
TPM4P67936 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.08□□□□□ -1.76
TPM4P67936 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.08□□□□□ -1.76
TPM4P67936 USP9YP32-201ENST00000452432 430 ntBASIC4.08□□□□□ -1.76
TPM4P67936 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.08□□□□□ -1.76
TPM4P67936 ZNF542P-204ENST00000482727 1305 ntBASIC4.08□□□□□ -1.76
TPM4P67936 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.08□□□□□ -1.76
TPM4P67936 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
TPM4P67936 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.08□□□□□ -1.76
TPM4P67936 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.08□□□□□ -1.76
TPM4P67936 AP000553.6-201ENST00000641242 118 ntBASIC4.08□□□□□ -1.76
TPM4P67936 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TPM4P67936 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TPM4P67936 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.07□□□□□ -1.76
TPM4P67936 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TPM4P67936 RLIMP1-201ENST00000339626 1680 ntBASIC4.07□□□□□ -1.76
TPM4P67936 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
TPM4P67936 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TPM4P67936 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TPM4P67936 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TPM4P67936 RAD1P1-201ENST00000231383 813 ntBASIC4.07□□□□□ -1.76
TPM4P67936 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TPM4P67936 MIR320B1-201ENST00000390209 79 ntBASIC4.07□□□□□ -1.76
TPM4P67936 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TPM4P67936 AC092832.1-201ENST00000422934 400 ntBASIC4.07□□□□□ -1.76
TPM4P67936 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.07□□□□□ -1.76
TPM4P67936 CYCSP42-201ENST00000450823 238 ntBASIC4.07□□□□□ -1.76
TPM4P67936 MRPS31P2-201ENST00000451581 518 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms