Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.82□□□□□ -1.8
PKNOX1P55347 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.82□□□□□ -1.8
PKNOX1P55347 MIR4330-201ENST00000579077 105 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.82□□□□□ -1.8
PKNOX1P55347 ZNF92P3-201ENST00000596594 954 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AP003117.1-201ENST00000602771 554 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 BRDTP1-201ENST00000605735 677 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AC015849.2-201ENST00000605738 409 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 AC090617.9-201ENST00000623751 147 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.82□□□□□ -1.8
PKNOX1P55347 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.82□□□□□ -1.8
PKNOX1P55347 ATE1-AS1-202ENST00000636460 506 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 AC106871.1-201ENST00000568324 3102 ntBASIC3.82□□□□□ -1.8
PKNOX1P55347 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PKNOX1P55347 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.81□□□□□ -1.8
PKNOX1P55347 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.81□□□□□ -1.8
PKNOX1P55347 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
PKNOX1P55347 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.81□□□□□ -1.8
PKNOX1P55347 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 RPL30P3-201ENST00000424262 333 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 OR5AW1P-201ENST00000426334 1006 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 AL031663.1-201ENST00000437445 219 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.81□□□□□ -1.8
PKNOX1P55347 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.81□□□□□ -1.8
PKNOX1P55347 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.81□□□□□ -1.8
PKNOX1P55347 TPMTP4-201ENST00000450749 678 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 RPS11P1-201ENST00000451072 473 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 DNAJC19P1-201ENST00000455312 319 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 AC010307.1-201ENST00000467206 836 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.81□□□□□ -1.8
PKNOX1P55347 AP002812.4-201ENST00000532139 286 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.81□□□□□ -1.8
PKNOX1P55347 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.81□□□□□ -1.8
PKNOX1P55347 RN7SL600P-201ENST00000581811 299 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 MIR3138-201ENST00000585238 82 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 AC135178.6-201ENST00000605314 398 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 AC107308.1-201ENST00000615897 301 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 AL136964.1-201ENST00000622038 2990 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 AC010435.1-201ENST00000623353 1177 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.81□□□□□ -1.8
PKNOX1P55347 ZNF90P1-201ENST00000480493 1951 ntBASIC3.81□□□□□ -1.8
PKNOX1P55347 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.81□□□□□ -1.8
PKNOX1P55347 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PKNOX1P55347 MTCO1P14-201ENST00000441695 1559 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AP002001.2-201ENST00000529025 1469 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKNOX1P55347 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.8□□□□□ -1.8
PKNOX1P55347 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKNOX1P55347 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKNOX1P55347 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKNOX1P55347 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.8□□□□□ -1.8
PKNOX1P55347 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.8□□□□□ -1.8
PKNOX1P55347 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.8□□□□□ -1.8
PKNOX1P55347 OR6C69P-201ENST00000394268 893 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 TAF9BP2-201ENST00000400856 499 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AL356057.1-202ENST00000402263 756 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 RPL26P29-201ENST00000415623 438 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 LINC01347-201ENST00000417964 355 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.8□□□□□ -1.8
PKNOX1P55347 AC115285.1-201ENST00000424879 736 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 RANP8-201ENST00000444720 713 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AC098824.1-201ENST00000453565 980 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AC089999.1-201ENST00000460336 374 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AC023050.1-201ENST00000498198 304 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.8□□□□□ -1.8
PKNOX1P55347 AC103833.1-201ENST00000517442 172 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
PKNOX1P55347 AC008802.1-201ENST00000519121 791 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AC087369.1-201ENST00000520775 996 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AC022790.1-201ENST00000522872 204 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.8□□□□□ -1.8
PKNOX1P55347 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.8□□□□□ -1.8
PKNOX1P55347 AL121594.4-201ENST00000556211 1196 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AC090877.1-201ENST00000561418 344 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AL133457.1-201ENST00000564251 987 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.8□□□□□ -1.8
PKNOX1P55347 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.8□□□□□ -1.8
PKNOX1P55347 AC104785.1-201ENST00000603220 588 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKNOX1P55347 AL445567.2-201ENST00000618935 498 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.8□□□□□ -1.8
PKNOX1P55347 CR381670.1-201ENST00000624291 1693 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKNOX1P55347 EXOC5P1-201ENST00000510543 1969 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 AL353743.4-201ENST00000422653 1547 ntBASIC3.8□□□□□ -1.8
PKNOX1P55347 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.79□□□□□ -1.8
PKNOX1P55347 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms