Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC007688.1-201ENST00000475592 759 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 AC118282.1-201ENST00000506408 765 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.6□□□□□ -1.83
GTF2A1P52655 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GTF2A1P52655 AC119751.1-201ENST00000513357 765 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 RNA5SP49-201ENST00000516450 115 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.6□□□□□ -1.83
GTF2A1P52655 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.6□□□□□ -1.83
GTF2A1P52655 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.6□□□□□ -1.83
GTF2A1P52655 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.6□□□□□ -1.83
GTF2A1P52655 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.6□□□□□ -1.83
GTF2A1P52655 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.6□□□□□ -1.83
GTF2A1P52655 AC114878.2-201ENST00000604863 1251 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 AL627309.6-201ENST00000606857 840 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 EIF2AP4-201ENST00000424793 1781 ntBASIC3.6□□□□□ -1.83
GTF2A1P52655 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GTF2A1P52655 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
GTF2A1P52655 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
GTF2A1P52655 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GTF2A1P52655 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
GTF2A1P52655 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GTF2A1P52655 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
GTF2A1P52655 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GTF2A1P52655 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GTF2A1P52655 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
GTF2A1P52655 OR13C3-201ENST00000374781 1108 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 HMGB1P10-201ENST00000395823 563 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 MIR887-201ENST00000401258 79 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 XKRYP4-201ENST00000414395 483 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.59□□□□□ -1.83
GTF2A1P52655 AL358472.1-201ENST00000431295 329 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 SETP8-201ENST00000435341 628 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GTF2A1P52655 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.59□□□□□ -1.83
GTF2A1P52655 HMGN2P20-201ENST00000437531 273 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 AC006011.1-201ENST00000442758 349 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GTF2A1P52655 COX6CP2-201ENST00000444980 225 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 XKRYP5-201ENST00000449659 483 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.59□□□□□ -1.83
GTF2A1P52655 RPL36AP33-201ENST00000450395 310 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 RPS26P21-201ENST00000475397 348 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 RN7SL691P-201ENST00000494487 301 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.59□□□□□ -1.83
GTF2A1P52655 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.59□□□□□ -1.83
GTF2A1P52655 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.59□□□□□ -1.83
GTF2A1P52655 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.59□□□□□ -1.83
GTF2A1P52655 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.59□□□□□ -1.83
GTF2A1P52655 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GTF2A1P52655 AL139041.1-201ENST00000605480 610 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.59□□□□□ -1.83
GTF2A1P52655 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.59□□□□□ -1.83
GTF2A1P52655 OR2BH1P-201ENST00000608850 864 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GTF2A1P52655 FAM27D1-201ENST00000612308 341 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.59□□□□□ -1.83
GTF2A1P52655 AL590240.3-201ENST00000621416 943 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 AC091953.3-201ENST00000623220 236 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 AC002044.3-201ENST00000623314 541 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 AP003497.2-201ENST00000624220 967 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GTF2A1P52655 ELL2P4-201ENST00000446870 1376 ntBASIC3.59□□□□□ -1.83
GTF2A1P52655 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
GTF2A1P52655 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
GTF2A1P52655 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GTF2A1P52655 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GTF2A1P52655 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GTF2A1P52655 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GTF2A1P52655 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
GTF2A1P52655 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.58□□□□□ -1.84
GTF2A1P52655 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.58□□□□□ -1.84
GTF2A1P52655 RPL30P3-201ENST00000424262 333 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AL590762.4-201ENST00000425885 253 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.58□□□□□ -1.84
GTF2A1P52655 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.58□□□□□ -1.84
GTF2A1P52655 RPL23AP46-201ENST00000438548 490 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AC074367.1-201ENST00000438685 1125 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.58□□□□□ -1.84
GTF2A1P52655 RPL7P32-201ENST00000457119 744 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AC012181.1-201ENST00000479895 423 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AC010476.1-201ENST00000519111 851 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AC022790.1-201ENST00000522872 204 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.58□□□□□ -1.84
GTF2A1P52655 AC105233.3-201ENST00000531125 744 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.58□□□□□ -1.84
GTF2A1P52655 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.58□□□□□ -1.84
GTF2A1P52655 AC044860.2-201ENST00000561005 179 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AC010653.1-201ENST00000571108 881 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.58□□□□□ -1.84
GTF2A1P52655 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
GTF2A1P52655 OR7E18P-201ENST00000592589 702 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 RPL12P25-202ENST00000598100 674 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 BNIP3P38-201ENST00000601117 544 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AL133393.1-201ENST00000603277 287 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 AL356274.1-201ENST00000617064 410 ntBASIC3.58□□□□□ -1.84
GTF2A1P52655 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.58□□□□□ -1.84
GTF2A1P52655 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.58□□□□□ -1.84
GTF2A1P52655 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.58□□□□□ -1.84
GTF2A1P52655 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms