Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCN3P51790 EIF1P3-201ENST00000423841 334 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 RPS7P5-201ENST00000441482 581 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCN3P51790 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCN3P51790 AF213884.1-201ENST00000488102 463 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC023050.1-201ENST00000498198 304 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC008837.1-201ENST00000511513 412 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLCN3P51790 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCN3P51790 RN7SKP265-201ENST00000516448 223 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC091163.3-201ENST00000518269 1144 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.69□□□□□ -1.66
CLCN3P51790 AC008562.1-201ENST00000521763 330 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC006064.5-201ENST00000541782 248 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCN3P51790 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC090751.1-201ENST00000566966 267 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC023824.3-201ENST00000569003 562 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 MTND4LP24-201ENST00000572277 291 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.69□□□□□ -1.66
CLCN3P51790 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCN3P51790 BNIP3P4-201ENST00000604946 565 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC097505.1-201ENST00000610199 565 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AL353726.1-201ENST00000614041 1000 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC104985.3-201ENST00000623479 597 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 AC068787.1-201ENST00000623908 691 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.69□□□□□ -1.66
CLCN3P51790 AC017104.5-201ENST00000637647 639 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLCN3P51790 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCN3P51790 AC009229.4-201ENST00000623854 1947 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CLCN3P51790 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CLCN3P51790 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.69□□□□□ -1.66
CLCN3P51790 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLCN3P51790 AL133243.3-201ENST00000617415 3004 ntBASIC4.69□□□□□ -1.66
CLCN3P51790 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLCN3P51790 AC021242.1-201ENST00000507315 2035 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 EOGT-210ENST00000615922 1931 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.68□□□□□ -1.66
CLCN3P51790 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 RNA5SP130-201ENST00000364431 114 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.68□□□□□ -1.66
CLCN3P51790 RNU2-6P-201ENST00000411404 190 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 AL356095.1-201ENST00000417217 199 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.68□□□□□ -1.66
CLCN3P51790 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.68□□□□□ -1.66
CLCN3P51790 AC092634.2-201ENST00000428146 1010 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 VDAC1P6-201ENST00000430062 855 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.68□□□□□ -1.66
CLCN3P51790 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.68□□□□□ -1.66
CLCN3P51790 AL009048.1-201ENST00000450437 298 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.68□□□□□ -1.66
CLCN3P51790 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.68□□□□□ -1.66
CLCN3P51790 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.68□□□□□ -1.66
CLCN3P51790 NDUFS5P6-201ENST00000529136 295 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 AC105233.3-201ENST00000531125 744 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 LRRC6P1-201ENST00000532188 885 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.68□□□□□ -1.66
CLCN3P51790 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.68□□□□□ -1.66
CLCN3P51790 BNIP3P5-201ENST00000562290 498 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.68□□□□□ -1.66
CLCN3P51790 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.68□□□□□ -1.66
CLCN3P51790 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.68□□□□□ -1.66
CLCN3P51790 NTAN1P1-201ENST00000603150 646 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 AC024060.1-201ENST00000607052 494 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 AC009974.1-201ENST00000608881 455 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.68□□□□□ -1.66
CLCN3P51790 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 AC116447.1-201ENST00000613153 453 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 AP000484.1-201ENST00000620067 1252 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.68□□□□□ -1.66
CLCN3P51790 AL121594.5-201ENST00000631724 573 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CLCN3P51790 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.68□□□□□ -1.66
CLCN3P51790 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
CLCN3P51790 AC104446.1-201ENST00000613728 1321 ntBASIC4.68□□□□□ -1.66
CLCN3P51790 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CLCN3P51790 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CLCN3P51790 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLCN3P51790 RNU6-353P-201ENST00000364266 108 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.67□□□□□ -1.66
CLCN3P51790 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CLCN3P51790 SNORA37-201ENST00000384504 129 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 MIR92A2-201ENST00000385299 75 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 RNA5SP296-201ENST00000410523 111 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.67□□□□□ -1.66
CLCN3P51790 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CLCN3P51790 DYNLL1P7-201ENST00000429273 258 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms