Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC021755.4-201ENST00000616620 456 ntBASIC5.26□□□□□ -1.57
TM4SF4P48230 uc_338.13-201ENST00000618243 179 ntBASIC5.26□□□□□ -1.57
TM4SF4P48230 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF4P48230 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.26□□□□□ -1.57
TM4SF4P48230 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.26□□□□□ -1.57
TM4SF4P48230 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TM4SF4P48230 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF4P48230 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.26□□□□□ -1.57
TM4SF4P48230 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF4P48230 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TM4SF4P48230 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TM4SF4P48230 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.26□□□□□ -1.57
TM4SF4P48230 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TM4SF4P48230 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.26□□□□□ -1.57
TM4SF4P48230 AC107081.3-201ENST00000612715 2034 ntBASIC5.26□□□□□ -1.57
TM4SF4P48230 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TM4SF4P48230 ZNF876P-202ENST00000398732 1485 ntBASIC5.26□□□□□ -1.57
TM4SF4P48230 AC106871.1-201ENST00000568324 3102 ntBASIC5.26□□□□□ -1.57
TM4SF4P48230 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 RNA5SP391-201ENST00000363456 119 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 RNU6-525P-201ENST00000363685 104 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 AL121978.1-201ENST00000402778 359 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 CRYBB2P1-203ENST00000415709 538 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 MTCO2P25-201ENST00000447065 681 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 DHFRP3-201ENST00000455595 559 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 SNORA3.4-201ENST00000515969 96 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 RNU6-885P-201ENST00000516607 104 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.25□□□□□ -1.57
TM4SF4P48230 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.25□□□□□ -1.57
TM4SF4P48230 AC136777.2-201ENST00000522979 358 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
TM4SF4P48230 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.25□□□□□ -1.57
TM4SF4P48230 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.25□□□□□ -1.57
TM4SF4P48230 RN7SL600P-201ENST00000581811 299 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 AC091057.2-201ENST00000602594 792 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 AC093388.1-201ENST00000609166 430 ntBASIC5.25□□□□□ -1.57
TM4SF4P48230 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.25□□□□□ -1.57
TM4SF4P48230 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TM4SF4P48230 DDX18P3-201ENST00000404856 2007 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF4P48230 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF4P48230 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TM4SF4P48230 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF4P48230 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.24□□□□□ -1.57
TM4SF4P48230 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
TM4SF4P48230 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TM4SF4P48230 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF4P48230 RNU6-582P-201ENST00000362989 107 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 RNU6-560P-201ENST00000364007 108 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 RNA5SP513-201ENST00000364648 118 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF4P48230 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF4P48230 RPL12P9-201ENST00000412942 488 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF4P48230 AC010881.1-201ENST00000433830 235 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF4P48230 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF4P48230 AC093155.1-201ENST00000440164 826 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.24□□□□□ -1.57
TM4SF4P48230 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF4P48230 PRSS3P4-201ENST00000453323 162 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF4P48230 USP9YP25-201ENST00000457708 443 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 RPL23AP2-201ENST00000471227 466 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.24□□□□□ -1.57
TM4SF4P48230 AC112673.1-201ENST00000513168 575 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.24□□□□□ -1.57
TM4SF4P48230 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF4P48230 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TM4SF4P48230 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.24□□□□□ -1.57
TM4SF4P48230 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.24□□□□□ -1.57
TM4SF4P48230 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.24□□□□□ -1.57
TM4SF4P48230 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.24□□□□□ -1.57
TM4SF4P48230 BNIP3P26-201ENST00000600827 554 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 GAS5-AS1-201ENST00000602767 694 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 AC079395.3-201ENST00000615161 484 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 AF001550.2-201ENST00000636643 217 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 AC000095.2-202ENST00000637415 154 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TM4SF4P48230 AC010300.1-201ENST00000600671 5134 ntBASIC5.24□□□□□ -1.57
TM4SF4P48230 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms