Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RNU4-74P-201ENST00000411280 161 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC009518.2-201ENST00000418056 731 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC062016.2-201ENST00000420950 676 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AL138785.1-201ENST00000425821 331 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXA11P31270 CDY14P-201ENST00000431260 1014 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 RPS24P8-201ENST00000431490 402 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXA11P31270 GTF2IP3-201ENST00000433887 494 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXA11P31270 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXA11P31270 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 CDY23P-201ENST00000451661 1014 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC008280.2-201ENST00000455473 307 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC108751.2-201ENST00000469993 231 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 MTND2P14-201ENST00000482139 351 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC091435.1-201ENST00000505442 584 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXA11P31270 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXA11P31270 AC008958.1-201ENST00000511047 682 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXA11P31270 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXA11P31270 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXA11P31270 CYB5AP5-201ENST00000549779 389 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 ZNF321P-202ENST00000550843 495 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AL109766.1-201ENST00000555080 552 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXA11P31270 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXA11P31270 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA11P31270 IPO5P1-202ENST00000600039 287 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AC010201.1-201ENST00000605051 540 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HOXA11P31270 AL121895.2-201ENST00000619558 447 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 AP006248.2-201ENST00000623309 592 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA11P31270 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXA11P31270 MIR3974-201ENST00000637126 96 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXA11P31270 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXA11P31270 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXA11P31270 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 SNORA70C-201ENST00000384538 135 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AL161909.1-201ENST00000397390 712 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AC097374.1-203ENST00000400783 485 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 RPS27AP11-201ENST00000402798 447 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 HNRNPDP2-201ENST00000406475 478 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 RPS20P14-201ENST00000412545 360 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA11P31270 MTND2P18-201ENST00000419962 1030 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA11P31270 RPEP2-201ENST00000432149 701 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA11P31270 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA11P31270 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA11P31270 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXA11P31270 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA11P31270 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXA11P31270 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXA11P31270 AL162388.1-201ENST00000450912 352 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AC009963.2-201ENST00000453431 138 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 PTGES3P5-201ENST00000455109 434 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AL445433.1-201ENST00000457507 257 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 RPL5P30-201ENST00000465511 891 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA11P31270 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA11P31270 AC010486.2-201ENST00000505572 483 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AC108475.1-201ENST00000507880 950 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 PARP4P3-201ENST00000510265 317 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 RNA5SP49-201ENST00000516450 115 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXA11P31270 MRPL49P2-201ENST00000521066 465 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA11P31270 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA11P31270 RN7SL176P-201ENST00000580352 264 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXA11P31270 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXA11P31270 Z82195.1-201ENST00000604558 398 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AL354984.3-201ENST00000604803 325 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AL355816.1-201ENST00000607951 118 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXA11P31270 AL138478.1-201ENST00000612252 832 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AC243654.2-201ENST00000612843 443 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 AC000123.3-201ENST00000624029 4975 ntBASIC4.76□□□□□ -1.65
HOXA11P31270 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXA11P31270 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXA11P31270 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXA11P31270 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HOXA11P31270 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HOXA11P31270 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXA11P31270 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms