Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL158062.1-201ENST00000619632 745 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.57□□□□□ -1.52
CLIP1P30622 AC127502.3-201ENST00000636170 1206 ntBASIC5.57□□□□□ -1.52
CLIP1P30622 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP1P30622 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CLIP1P30622 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP1P30622 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP1P30622 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP1P30622 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP1P30622 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP1P30622 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP1P30622 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP1P30622 NPM1P48-201ENST00000436002 853 ntBASIC5.56□□□□□ -1.52
CLIP1P30622 SKP1P1-201ENST00000438081 489 ntBASIC5.56□□□□□ -1.52
CLIP1P30622 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.56□□□□□ -1.52
CLIP1P30622 AC073522.1-201ENST00000483312 377 ntBASIC5.56□□□□□ -1.52
CLIP1P30622 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP1P30622 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP1P30622 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP1P30622 AC106782.4-201ENST00000568264 210 ntBASIC5.56□□□□□ -1.52
CLIP1P30622 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.56□□□□□ -1.52
CLIP1P30622 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP1P30622 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP1P30622 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLIP1P30622 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP1P30622 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP1P30622 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP1P30622 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLIP1P30622 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP1P30622 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP1P30622 RPS20P1-201ENST00000434853 354 ntBASIC5.55□□□□□ -1.52
CLIP1P30622 RPS4XP2-201ENST00000458402 793 ntBASIC5.55□□□□□ -1.52
CLIP1P30622 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP1P30622 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP1P30622 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP1P30622 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP1P30622 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP1P30622 MIR8057-201ENST00000620957 69 ntBASIC5.55□□□□□ -1.52
CLIP1P30622 AC022149.2-201ENST00000621061 203 ntBASIC5.55□□□□□ -1.52
CLIP1P30622 OTUD4P1-201ENST00000237841 3067 ntBASIC5.55□□□□□ -1.52
CLIP1P30622 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP1P30622 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP1P30622 CR381670.1-201ENST00000624291 1693 ntBASIC5.54□□□□□ -1.52
CLIP1P30622 AL645937.1-201ENST00000641739 1652 ntBASIC5.54□□□□□ -1.52
CLIP1P30622 AL591363.1-201ENST00000450091 483 ntBASIC5.54□□□□□ -1.52
CLIP1P30622 DNAJC19P1-201ENST00000455312 319 ntBASIC5.54□□□□□ -1.52
CLIP1P30622 SNORA59A-201ENST00000459326 152 ntBASIC5.54□□□□□ -1.52
CLIP1P30622 AC023598.1-201ENST00000472521 361 ntBASIC5.54□□□□□ -1.52
CLIP1P30622 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP1P30622 AC016550.3-201ENST00000515706 767 ntBASIC5.54□□□□□ -1.52
CLIP1P30622 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP1P30622 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP1P30622 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP1P30622 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP1P30622 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLIP1P30622 LINC01355-201ENST00000566551 5444 ntBASIC5.53□□□□□ -1.52
CLIP1P30622 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.53□□□□□ -1.52
CLIP1P30622 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CLIP1P30622 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP1P30622 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP1P30622 AL512649.1-201ENST00000428997 581 ntBASIC5.53□□□□□ -1.52
CLIP1P30622 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP1P30622 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP1P30622 AC005229.2-201ENST00000456995 399 ntBASIC5.53□□□□□ -1.52
CLIP1P30622 AP000942.1-201ENST00000463969 747 ntBASIC5.53□□□□□ -1.52
CLIP1P30622 AC005798.1-201ENST00000513715 387 ntBASIC5.53□□□□□ -1.52
CLIP1P30622 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.53□□□□□ -1.52
CLIP1P30622 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.53□□□□□ -1.52
CLIP1P30622 AC019072.1-201ENST00000604535 1551 ntBASIC5.53□□□□□ -1.52
CLIP1P30622 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLIP1P30622 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP1P30622 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP1P30622 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP1P30622 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP1P30622 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP1P30622 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP1P30622 RPF2P1-201ENST00000424137 906 ntBASIC5.52□□□□□ -1.53
CLIP1P30622 AC006989.1-201ENST00000427212 131 ntBASIC5.52□□□□□ -1.53
CLIP1P30622 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP1P30622 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP1P30622 RPS3AP50-201ENST00000487064 803 ntBASIC5.52□□□□□ -1.53
CLIP1P30622 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP1P30622 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.52□□□□□ -1.53
CLIP1P30622 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP1P30622 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.52□□□□□ -1.53
CLIP1P30622 AC119751.5-201ENST00000514077 770 ntBASIC5.52□□□□□ -1.53
CLIP1P30622 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.52□□□□□ -1.53
CLIP1P30622 AC026333.2-201ENST00000542164 106 ntBASIC5.52□□□□□ -1.53
CLIP1P30622 AC011611.1-201ENST00000552179 197 ntBASIC5.52□□□□□ -1.53
CLIP1P30622 AL121576.1-201ENST00000556055 276 ntBASIC5.52□□□□□ -1.53
CLIP1P30622 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP1P30622 AC068790.5-201ENST00000602741 355 ntBASIC5.52□□□□□ -1.53
CLIP1P30622 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLIP1P30622 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLIP1P30622 NMD3P1-201ENST00000439704 1488 ntBASIC5.51□□□□□ -1.53
CLIP1P30622 U3.19-201ENST00000390893 196 ntBASIC5.51□□□□□ -1.53
CLIP1P30622 RPS24P12-201ENST00000402084 394 ntBASIC5.51□□□□□ -1.53
CLIP1P30622 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.51□□□□□ -1.53
CLIP1P30622 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.51□□□□□ -1.53
CLIP1P30622 IGKV2-26-201ENST00000518305 343 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms