Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.75□□□□□ -1.49
CNGA1P29973 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNGA1P29973 OR4A15-201ENST00000314706 1035 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 OR1L6-202ENST00000373684 1044 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 TPT1P2-201ENST00000413105 503 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.75□□□□□ -1.49
CNGA1P29973 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.75□□□□□ -1.49
CNGA1P29973 AL591503.2-201ENST00000442314 1005 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 OR1H1P-201ENST00000448731 937 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.75□□□□□ -1.49
CNGA1P29973 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.75□□□□□ -1.49
CNGA1P29973 AC010683.1-201ENST00000473673 378 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 RPS3AP43-201ENST00000479743 781 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.75□□□□□ -1.49
CNGA1P29973 GAPDHP56-201ENST00000506031 988 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 HSPE1P23-201ENST00000509838 286 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.75□□□□□ -1.49
CNGA1P29973 AC006427.1-201ENST00000514359 712 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.75□□□□□ -1.49
CNGA1P29973 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.75□□□□□ -1.49
CNGA1P29973 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.75□□□□□ -1.49
CNGA1P29973 PARP1P2-201ENST00000556806 195 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.75□□□□□ -1.49
CNGA1P29973 AC011626.1-201ENST00000604710 562 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC069304.2-201ENST00000605154 435 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC064807.4-201ENST00000607201 407 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC245297.2-201ENST00000610119 565 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AL359535.1-201ENST00000612100 1087 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC004223.4-201ENST00000612426 332 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AL607023.1-201ENST00000620045 248 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC098679.5-201ENST00000624394 571 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AC010608.2-201ENST00000624830 470 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 AL034549.2-201ENST00000618285 3373 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNGA1P29973 AC011755.1-201ENST00000623763 2049 ntBASIC5.75□□□□□ -1.49
CNGA1P29973 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CNGA1P29973 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CNGA1P29973 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNGA1P29973 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.74□□□□□ -1.49
CNGA1P29973 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.74□□□□□ -1.49
CNGA1P29973 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.74□□□□□ -1.49
CNGA1P29973 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 RNU6-553P-201ENST00000364047 96 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 SNORD116-1-201ENST00000384335 95 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 MIR589-201ENST00000385238 99 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 RNA5SP332-201ENST00000391063 115 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CNGA1P29973 AL450338.1-201ENST00000407987 512 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 MIR1302-8-201ENST00000408342 128 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 RNA5SP113-201ENST00000410486 84 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 SETP15-201ENST00000412724 337 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.74□□□□□ -1.49
CNGA1P29973 TIMM9P2-201ENST00000419324 266 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 AC062016.2-201ENST00000420950 676 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 UBE2V1P1-201ENST00000430836 445 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.74□□□□□ -1.49
CNGA1P29973 MTND2P20-201ENST00000440805 661 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 SLC31A1P1-201ENST00000451221 567 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 RN7SL443P-201ENST00000464331 290 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 RPS23P7-201ENST00000466210 444 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 AC112206.1-201ENST00000468416 477 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 HMGB1P28-201ENST00000507778 552 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 MRPS33P2-201ENST00000507850 322 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 OR5BM1P-201ENST00000512021 366 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 RNU6-759P-201ENST00000516740 103 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 OR5AK1P-201ENST00000524837 922 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.74□□□□□ -1.49
CNGA1P29973 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.74□□□□□ -1.49
CNGA1P29973 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.74□□□□□ -1.49
CNGA1P29973 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.74□□□□□ -1.49
CNGA1P29973 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.74□□□□□ -1.49
CNGA1P29973 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.74□□□□□ -1.49
CNGA1P29973 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.74□□□□□ -1.49
CNGA1P29973 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.74□□□□□ -1.49
CNGA1P29973 Z98755.1-201ENST00000407015 1384 ntBASIC5.74□□□□□ -1.49
CNGA1P29973 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CNGA1P29973 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.73□□□□□ -1.49
CNGA1P29973 AL390862.1-201ENST00000635467 1469 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms