Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.39□□□□□ -1.39
LIG1P18858 POLR2KP1-201ENST00000553226 168 ntBASIC6.39□□□□□ -1.39
LIG1P18858 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.39□□□□□ -1.39
LIG1P18858 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
LIG1P18858 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.39□□□□□ -1.39
LIG1P18858 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.39□□□□□ -1.39
LIG1P18858 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.39□□□□□ -1.39
LIG1P18858 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.39□□□□□ -1.39
LIG1P18858 AC010680.3-201ENST00000604215 520 ntBASIC6.39□□□□□ -1.39
LIG1P18858 AL590282.1-201ENST00000610379 1136 ntBASIC6.39□□□□□ -1.39
LIG1P18858 AP001506.1-201ENST00000615444 211 ntBASIC6.39□□□□□ -1.39
LIG1P18858 AC127024.6-201ENST00000621598 424 ntBASIC6.39□□□□□ -1.39
LIG1P18858 AP002505.2-201ENST00000623585 696 ntBASIC6.39□□□□□ -1.39
LIG1P18858 MIR193BHG-214ENST00000641765 509 ntBASIC6.39□□□□□ -1.39
LIG1P18858 AC026523.2-201ENST00000625039 7739 ntBASIC6.39□□□□□ -1.39
LIG1P18858 AC079097.1-201ENST00000512187 1399 ntBASIC6.39□□□□□ -1.39
LIG1P18858 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
LIG1P18858 AL022578.1-201ENST00000439330 1433 ntBASIC6.39□□□□□ -1.39
LIG1P18858 RARSP1-201ENST00000542842 1418 ntBASIC6.39□□□□□ -1.39
LIG1P18858 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
LIG1P18858 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.39□□□□□ -1.39
LIG1P18858 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LIG1P18858 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIG1P18858 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIG1P18858 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LIG1P18858 RNA5SP187-201ENST00000384400 119 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AL450992.3-201ENST00000413192 568 ntBASIC6.38□□□□□ -1.39
LIG1P18858 RPS6P23-201ENST00000413224 722 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.38□□□□□ -1.39
LIG1P18858 RNF10P1-201ENST00000418589 369 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC062016.2-201ENST00000420950 676 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 AL356583.2-201ENST00000426536 280 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.38□□□□□ -1.39
LIG1P18858 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.38□□□□□ -1.39
LIG1P18858 AC073465.2-201ENST00000440938 498 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.38□□□□□ -1.39
LIG1P18858 AL596266.1-201ENST00000448132 400 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AL935212.3-201ENST00000450729 284 ntBASIC6.38□□□□□ -1.39
LIG1P18858 YWHAEP1-201ENST00000453697 763 ntBASIC6.38□□□□□ -1.39
LIG1P18858 OR52A4P-201ENST00000472867 958 ntBASIC6.38□□□□□ -1.39
LIG1P18858 RN7SL570P-201ENST00000484405 292 ntBASIC6.38□□□□□ -1.39
LIG1P18858 RPL7P51-201ENST00000490532 749 ntBASIC6.38□□□□□ -1.39
LIG1P18858 NDUFA5P12-201ENST00000503796 343 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 AC097173.1-201ENST00000505862 819 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC048346.1-201ENST00000510247 144 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.38□□□□□ -1.39
LIG1P18858 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.38□□□□□ -1.39
LIG1P18858 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.38□□□□□ -1.39
LIG1P18858 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.38□□□□□ -1.39
LIG1P18858 HMGB1P33-201ENST00000563485 527 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AL391840.1-201ENST00000571144 367 ntBASIC6.38□□□□□ -1.39
LIG1P18858 MTCO3P13-201ENST00000577757 781 ntBASIC6.38□□□□□ -1.39
LIG1P18858 MIR548Y-201ENST00000582739 110 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC005261.5-201ENST00000596280 355 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC103792.1-201ENST00000603591 919 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 RN7SL787P-201ENST00000613000 284 ntBASIC6.38□□□□□ -1.39
LIG1P18858 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC234782.5-201ENST00000617723 324 ntBASIC6.38□□□□□ -1.39
LIG1P18858 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.38□□□□□ -1.39
LIG1P18858 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.38□□□□□ -1.39
LIG1P18858 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIG1P18858 MT-RNR2-201ENST00000387347 1559 ntBASIC6.38□□□□□ -1.39
LIG1P18858 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LIG1P18858 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LIG1P18858 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LIG1P18858 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
LIG1P18858 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
LIG1P18858 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.37□□□□□ -1.39
LIG1P18858 AL078621.3-201ENST00000623707 2042 ntBASIC6.37□□□□□ -1.39
LIG1P18858 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LIG1P18858 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIG1P18858 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIG1P18858 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.37□□□□□ -1.39
LIG1P18858 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIG1P18858 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIG1P18858 OR5BR1P-201ENST00000524992 1330 ntBASIC6.37□□□□□ -1.39
LIG1P18858 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LIG1P18858 Y_RNA.263-201ENST00000364659 114 ntBASIC6.37□□□□□ -1.39
LIG1P18858 RNU6-534P-201ENST00000364877 106 ntBASIC6.37□□□□□ -1.39
LIG1P18858 RN7SKP292-201ENST00000365522 317 ntBASIC6.37□□□□□ -1.39
LIG1P18858 RN7SKP269-201ENST00000365545 319 ntBASIC6.37□□□□□ -1.39
LIG1P18858 RNA5SP30-201ENST00000365552 115 ntBASIC6.37□□□□□ -1.39
LIG1P18858 OR7E101P-201ENST00000400428 513 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms