Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CFTRP13569 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.88□□□□□ -1.47
CFTRP13569 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.88□□□□□ -1.47
CFTRP13569 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.88□□□□□ -1.47
CFTRP13569 AL732372.2-225ENST00000642124 456 ntBASIC5.88□□□□□ -1.47
CFTRP13569 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CFTRP13569 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CFTRP13569 RNA5SP126-201ENST00000365092 109 ntBASIC5.87□□□□□ -1.47
CFTRP13569 RNA5SP306-201ENST00000411087 107 ntBASIC5.87□□□□□ -1.47
CFTRP13569 MOB1AP1-201ENST00000430903 535 ntBASIC5.87□□□□□ -1.47
CFTRP13569 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.87□□□□□ -1.47
CFTRP13569 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CFTRP13569 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CFTRP13569 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.87□□□□□ -1.47
CFTRP13569 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.87□□□□□ -1.47
CFTRP13569 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.87□□□□□ -1.47
CFTRP13569 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CFTRP13569 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.87□□□□□ -1.47
CFTRP13569 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CFTRP13569 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CFTRP13569 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CFTRP13569 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CFTRP13569 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CFTRP13569 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CFTRP13569 MIR422A-201ENST00000362286 90 ntBASIC5.86□□□□□ -1.47
CFTRP13569 RPL23AP69-201ENST00000431134 458 ntBASIC5.86□□□□□ -1.47
CFTRP13569 AC084357.1-201ENST00000473404 255 ntBASIC5.86□□□□□ -1.47
CFTRP13569 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.86□□□□□ -1.47
CFTRP13569 AC112198.1-201ENST00000505369 1220 ntBASIC5.86□□□□□ -1.47
CFTRP13569 AC118465.1-201ENST00000513820 1271 ntBASIC5.86□□□□□ -1.47
CFTRP13569 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.86□□□□□ -1.47
CFTRP13569 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.86□□□□□ -1.47
CFTRP13569 KLKP1-201ENST00000595979 403 ntBASIC5.86□□□□□ -1.47
CFTRP13569 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CFTRP13569 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.86□□□□□ -1.47
CFTRP13569 NMD3P1-201ENST00000439704 1488 ntBASIC5.86□□□□□ -1.47
CFTRP13569 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.86□□□□□ -1.47
CFTRP13569 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CFTRP13569 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 AC008489.1-201ENST00000524271 483 ntBASIC5.85□□□□□ -1.47
CFTRP13569 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.85□□□□□ -1.47
CFTRP13569 MIR7106-201ENST00000612419 65 ntBASIC5.85□□□□□ -1.47
CFTRP13569 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.85□□□□□ -1.47
CFTRP13569 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CFTRP13569 AC083843.3-201ENST00000623679 2186 ntBASIC5.85□□□□□ -1.47
CFTRP13569 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.85□□□□□ -1.47
CFTRP13569 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CFTRP13569 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CFTRP13569 SNORA54-201ENST00000384281 123 ntBASIC5.84□□□□□ -1.47
CFTRP13569 RPL5P18-201ENST00000406671 891 ntBASIC5.84□□□□□ -1.47
CFTRP13569 AL353678.1-201ENST00000422735 741 ntBASIC5.84□□□□□ -1.47
CFTRP13569 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.84□□□□□ -1.47
CFTRP13569 AC092809.1-201ENST00000441469 474 ntBASIC5.84□□□□□ -1.47
CFTRP13569 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.84□□□□□ -1.47
CFTRP13569 AC138409.2-202ENST00000507274 458 ntBASIC5.84□□□□□ -1.47
CFTRP13569 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.84□□□□□ -1.47
CFTRP13569 AP000926.4-201ENST00000527351 454 ntBASIC5.84□□□□□ -1.47
CFTRP13569 ATP5A1P2-202ENST00000616464 443 ntBASIC5.84□□□□□ -1.47
CFTRP13569 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CFTRP13569 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CFTRP13569 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CFTRP13569 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CFTRP13569 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.84□□□□□ -1.48
CFTRP13569 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.84□□□□□ -1.48
CFTRP13569 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CFTRP13569 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.83□□□□□ -1.48
CFTRP13569 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.83□□□□□ -1.48
CFTRP13569 EIF4EP1-201ENST00000422311 642 ntBASIC5.83□□□□□ -1.48
CFTRP13569 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.83□□□□□ -1.48
CFTRP13569 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.83□□□□□ -1.48
CFTRP13569 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.83□□□□□ -1.48
CFTRP13569 AL669942.2-201ENST00000620352 697 ntBASIC5.83□□□□□ -1.48
CFTRP13569 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.83□□□□□ -1.48
CFTRP13569 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CFTRP13569 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CFTRP13569 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.83□□□□□ -1.48
CFTRP13569 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.83□□□□□ -1.48
CFTRP13569 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CFTRP13569 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CFTRP13569 OTUD4P1-201ENST00000237841 3067 ntBASIC5.83□□□□□ -1.48
CFTRP13569 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.83□□□□□ -1.48
CFTRP13569 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CFTRP13569 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CFTRP13569 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CFTRP13569 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CFTRP13569 CCDC75P1-201ENST00000469247 791 ntBASIC5.83□□□□□ -1.48
CFTRP13569 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.83□□□□□ -1.48
CFTRP13569 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.83□□□□□ -1.48
CFTRP13569 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.83□□□□□ -1.48
CFTRP13569 AC018442.3-201ENST00000523025 183 ntBASIC5.83□□□□□ -1.48
CFTRP13569 OR4R3P-201ENST00000525084 838 ntBASIC5.83□□□□□ -1.48
CFTRP13569 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.83□□□□□ -1.48
CFTRP13569 MIR3162-201ENST00000581818 82 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms