Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.3□□□□□ -1.4
RARAP10276 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.3□□□□□ -1.4
RARAP10276 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.3□□□□□ -1.4
RARAP10276 Y_RNA.387-201ENST00000383918 102 ntBASIC6.3□□□□□ -1.4
RARAP10276 RNU6-730P-201ENST00000383954 104 ntBASIC6.3□□□□□ -1.4
RARAP10276 Y_RNA.579-201ENST00000390939 94 ntBASIC6.3□□□□□ -1.4
RARAP10276 NPM1P38-201ENST00000403835 865 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC245096.1-201ENST00000413104 546 ntBASIC6.3□□□□□ -1.4
RARAP10276 AL354868.1-201ENST00000417077 482 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC009161.1-201ENST00000417306 376 ntBASIC6.3□□□□□ -1.4
RARAP10276 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.3□□□□□ -1.4
RARAP10276 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 AL353777.1-201ENST00000425552 326 ntBASIC6.3□□□□□ -1.4
RARAP10276 HMGB3P10-201ENST00000434734 572 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC073410.1-201ENST00000435125 589 ntBASIC6.3□□□□□ -1.4
RARAP10276 IPO7P1-201ENST00000442031 636 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC002553.3-201ENST00000453002 341 ntBASIC6.3□□□□□ -1.4
RARAP10276 Z83838.1-202ENST00000456225 839 ntBASIC6.3□□□□□ -1.4
RARAP10276 RPS15AP1-201ENST00000457423 391 ntBASIC6.3□□□□□ -1.4
RARAP10276 RPL7P15-201ENST00000461190 712 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.3□□□□□ -1.4
RARAP10276 UBA52P3-201ENST00000491303 382 ntBASIC6.3□□□□□ -1.4
RARAP10276 RN7SL568P-201ENST00000493069 298 ntBASIC6.3□□□□□ -1.4
RARAP10276 RN7SL362P-201ENST00000494228 267 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC108693.1-201ENST00000496068 432 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.3□□□□□ -1.4
RARAP10276 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.3□□□□□ -1.4
RARAP10276 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.3□□□□□ -1.4
RARAP10276 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.3□□□□□ -1.4
RARAP10276 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.3□□□□□ -1.4
RARAP10276 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 RPL26P30-202ENST00000602923 645 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC021646.1-201ENST00000605469 484 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC018690.1-201ENST00000608144 626 ntBASIC6.3□□□□□ -1.4
RARAP10276 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 AC096861.1-201ENST00000616652 240 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.3□□□□□ -1.4
RARAP10276 AC073488.6-201ENST00000632293 754 ntBASIC6.3□□□□□ -1.4
RARAP10276 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RARAP10276 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RARAP10276 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.3□□□□□ -1.4
RARAP10276 AC097504.1-201ENST00000515103 2415 ntBASIC6.3□□□□□ -1.4
RARAP10276 AC107021.2-201ENST00000567714 2095 ntBASIC6.3□□□□□ -1.4
RARAP10276 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RARAP10276 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RARAP10276 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.3□□□□□ -1.4
RARAP10276 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RARAP10276 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.29□□□□□ -1.4
RARAP10276 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RARAP10276 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 RNU6-463P-201ENST00000384340 107 ntBASIC6.29□□□□□ -1.4
RARAP10276 RN7SKP17-201ENST00000411242 351 ntBASIC6.29□□□□□ -1.4
RARAP10276 AL161631.1-201ENST00000417933 486 ntBASIC6.29□□□□□ -1.4
RARAP10276 SRIP2-201ENST00000428470 166 ntBASIC6.29□□□□□ -1.4
RARAP10276 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.29□□□□□ -1.4
RARAP10276 AC108479.1-201ENST00000431142 427 ntBASIC6.29□□□□□ -1.4
RARAP10276 TUBB4BP6-201ENST00000437576 479 ntBASIC6.29□□□□□ -1.4
RARAP10276 RPS15AP9-201ENST00000439856 381 ntBASIC6.29□□□□□ -1.4
RARAP10276 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.29□□□□□ -1.4
RARAP10276 GAPDHP14-201ENST00000450472 937 ntBASIC6.29□□□□□ -1.4
RARAP10276 Y_RNA.639-201ENST00000458981 102 ntBASIC6.29□□□□□ -1.4
RARAP10276 ACA64.4-201ENST00000459070 127 ntBASIC6.29□□□□□ -1.4
RARAP10276 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.29□□□□□ -1.4
RARAP10276 RPL7P39-201ENST00000481157 744 ntBASIC6.29□□□□□ -1.4
RARAP10276 AP002453.1-201ENST00000492327 668 ntBASIC6.29□□□□□ -1.4
RARAP10276 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.29□□□□□ -1.4
RARAP10276 TMEM251P1-201ENST00000503717 318 ntBASIC6.29□□□□□ -1.4
RARAP10276 AC113367.2-201ENST00000505749 160 ntBASIC6.29□□□□□ -1.4
RARAP10276 AC112484.3-201ENST00000505910 329 ntBASIC6.29□□□□□ -1.4
RARAP10276 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.29□□□□□ -1.4
RARAP10276 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.29□□□□□ -1.4
RARAP10276 RNU6-1170P-201ENST00000515974 106 ntBASIC6.29□□□□□ -1.4
RARAP10276 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.29□□□□□ -1.4
RARAP10276 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RARAP10276 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.29□□□□□ -1.4
RARAP10276 AC136777.2-201ENST00000522979 358 ntBASIC6.29□□□□□ -1.4
RARAP10276 AC022861.1-201ENST00000522981 663 ntBASIC6.29□□□□□ -1.4
RARAP10276 PSMA2P1-201ENST00000526365 646 ntBASIC6.29□□□□□ -1.4
RARAP10276 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.29□□□□□ -1.4
RARAP10276 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 RN7SL230P-201ENST00000580835 303 ntBASIC6.29□□□□□ -1.4
RARAP10276 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.29□□□□□ -1.4
RARAP10276 AC008737.2-201ENST00000599446 118 ntBASIC6.29□□□□□ -1.4
RARAP10276 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.29□□□□□ -1.4
RARAP10276 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.29□□□□□ -1.4
RARAP10276 AC109446.4-201ENST00000623235 2755 ntBASIC6.29□□□□□ -1.4
RARAP10276 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RARAP10276 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RARAP10276 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms