Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 RNU6-1279P-201ENST00000383917 103 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A2P05997 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A2P05997 AC244033.1-201ENST00000426826 870 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A2P05997 FTH1P25-201ENST00000447665 469 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.72□□□□□ -1.65
COL5A2P05997 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.72□□□□□ -1.65
COL5A2P05997 RPS3AP14-201ENST00000483907 780 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.72□□□□□ -1.65
COL5A2P05997 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A2P05997 FTH1P9-201ENST00000513251 355 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 AC112206.4-201ENST00000515142 405 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A2P05997 UBTFL9-201ENST00000534504 1148 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.72□□□□□ -1.65
COL5A2P05997 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A2P05997 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A2P05997 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.72□□□□□ -1.65
COL5A2P05997 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A2P05997 BNIP3P39-201ENST00000601077 554 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A2P05997 AC015722.2-201ENST00000622210 551 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 AC104820.1-201ENST00000624183 307 ntBASIC4.72□□□□□ -1.65
COL5A2P05997 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL5A2P05997 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL5A2P05997 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL5A2P05997 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL5A2P05997 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A2P05997 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.71□□□□□ -1.65
COL5A2P05997 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL5A2P05997 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
COL5A2P05997 IL6STP1-201ENST00000346911 1020 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 AL034403.1-201ENST00000399414 885 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 RN7SKP111-201ENST00000410349 271 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 RN7SKP53-201ENST00000411337 315 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 GSTM3P2-201ENST00000412746 530 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.71□□□□□ -1.66
COL5A2P05997 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL5A2P05997 OR1AA1P-201ENST00000419597 916 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 OR5AW1P-201ENST00000426334 1006 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.71□□□□□ -1.66
COL5A2P05997 UBE2V2P1-201ENST00000434717 398 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 NDUFB1P1-201ENST00000435191 180 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.71□□□□□ -1.66
COL5A2P05997 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.71□□□□□ -1.66
COL5A2P05997 AC068993.1-201ENST00000546724 589 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.71□□□□□ -1.66
COL5A2P05997 AL163642.2-201ENST00000604722 1019 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 AL732618.1-201ENST00000623251 301 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 AL031595.2-201ENST00000624215 19071 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL5A2P05997 AC118273.1-201ENST00000525324 3006 ntBASIC4.71□□□□□ -1.66
COL5A2P05997 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL5A2P05997 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL5A2P05997 AC097504.1-201ENST00000515103 2415 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL5A2P05997 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL5A2P05997 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL5A2P05997 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.7□□□□□ -1.66
COL5A2P05997 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.7□□□□□ -1.66
COL5A2P05997 FTLP19-201ENST00000433300 394 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 AL831737.1-201ENST00000441288 271 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.7□□□□□ -1.66
COL5A2P05997 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.7□□□□□ -1.66
COL5A2P05997 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.7□□□□□ -1.66
COL5A2P05997 AC020893.1-201ENST00000502452 580 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.7□□□□□ -1.66
COL5A2P05997 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.7□□□□□ -1.66
COL5A2P05997 HMGB3P13-201ENST00000511263 607 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 RNU6-513P-201ENST00000516104 104 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
COL5A2P05997 UBE2NP1-201ENST00000545592 458 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.7□□□□□ -1.66
COL5A2P05997 AC027281.1-201ENST00000574178 758 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 GMCL1P2-201ENST00000605230 823 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.7□□□□□ -1.66
COL5A2P05997 AC092435.4-201ENST00000623012 4159 ntBASIC4.7□□□□□ -1.66
COL5A2P05997 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL5A2P05997 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.7□□□□□ -1.66
COL5A2P05997 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.7□□□□□ -1.66
COL5A2P05997 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL5A2P05997 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL5A2P05997 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.69□□□□□ -1.66
COL5A2P05997 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.69□□□□□ -1.66
COL5A2P05997 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL5A2P05997 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
COL5A2P05997 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.69□□□□□ -1.66
COL5A2P05997 AC002524.1-201ENST00000411687 547 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 AC096638.2-201ENST00000434965 711 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 TPTE2P3-201ENST00000441562 1189 ntBASIC4.69□□□□□ -1.66
COL5A2P05997 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.69□□□□□ -1.66
COL5A2P05997 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.69□□□□□ -1.66
COL5A2P05997 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
COL5A2P05997 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms