Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AP002812.1-201ENST00000495378 474 ntBASIC4.38□□□□□ -1.71
VTNP04004 AL139099.1-201ENST00000497398 403 ntBASIC4.38□□□□□ -1.71
VTNP04004 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VTNP04004 TPT1P8-201ENST00000510120 555 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 AC021146.3-201ENST00000511911 260 ntBASIC4.38□□□□□ -1.71
VTNP04004 NDUFA5P2-201ENST00000519723 344 ntBASIC4.38□□□□□ -1.71
VTNP04004 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.38□□□□□ -1.71
VTNP04004 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VTNP04004 YPEL5P3-201ENST00000547227 352 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.38□□□□□ -1.71
VTNP04004 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.38□□□□□ -1.71
VTNP04004 AL049870.4-201ENST00000555741 486 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.38□□□□□ -1.71
VTNP04004 BNIP3P40-201ENST00000596017 556 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC096553.1-201ENST00000605169 829 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.38□□□□□ -1.71
VTNP04004 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 AC016597.2-201ENST00000613256 341 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC104763.3-201ENST00000613765 618 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC078880.5-201ENST00000617845 421 ntBASIC4.38□□□□□ -1.71
VTNP04004 AP004607.9-201ENST00000618202 316 ntBASIC4.38□□□□□ -1.71
VTNP04004 AL445984.1-201ENST00000637834 659 ntBASIC4.38□□□□□ -1.71
VTNP04004 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 AC009313.2-201ENST00000417893 1941 ntBASIC4.38□□□□□ -1.71
VTNP04004 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VTNP04004 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VTNP04004 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VTNP04004 MTND5P11-201ENST00000511037 1812 ntBASIC4.37□□□□□ -1.71
VTNP04004 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VTNP04004 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VTNP04004 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VTNP04004 DDX18P4-201ENST00000511690 1966 ntBASIC4.37□□□□□ -1.71
VTNP04004 RNA5SP124-201ENST00000362739 110 ntBASIC4.37□□□□□ -1.71
VTNP04004 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VTNP04004 MIR670-201ENST00000390142 98 ntBASIC4.37□□□□□ -1.71
VTNP04004 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.37□□□□□ -1.71
VTNP04004 RNU4-74P-201ENST00000411280 161 ntBASIC4.37□□□□□ -1.71
VTNP04004 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.37□□□□□ -1.71
VTNP04004 Z97055.1-201ENST00000419730 712 ntBASIC4.37□□□□□ -1.71
VTNP04004 FO393419.3-201ENST00000428741 282 ntBASIC4.37□□□□□ -1.71
VTNP04004 MTCO3P21-201ENST00000430791 643 ntBASIC4.37□□□□□ -1.71
VTNP04004 GOT2P5-201ENST00000433995 546 ntBASIC4.37□□□□□ -1.71
VTNP04004 RPL6P5-201ENST00000445678 828 ntBASIC4.37□□□□□ -1.71
VTNP04004 AC069540.1-201ENST00000446320 988 ntBASIC4.37□□□□□ -1.71
VTNP04004 AL096829.2-201ENST00000446582 742 ntBASIC4.37□□□□□ -1.71
VTNP04004 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.37□□□□□ -1.71
VTNP04004 FABP3P2-201ENST00000453169 399 ntBASIC4.37□□□□□ -1.71
VTNP04004 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.37□□□□□ -1.71
VTNP04004 AC008379.1-201ENST00000463655 464 ntBASIC4.37□□□□□ -1.71
VTNP04004 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.37□□□□□ -1.71
VTNP04004 AC133963.2-201ENST00000513686 578 ntBASIC4.37□□□□□ -1.71
VTNP04004 RNU6-415P-201ENST00000516252 97 ntBASIC4.37□□□□□ -1.71
VTNP04004 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.37□□□□□ -1.71
VTNP04004 AC008083.2-201ENST00000546707 476 ntBASIC4.37□□□□□ -1.71
VTNP04004 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.37□□□□□ -1.71
VTNP04004 AC007599.1-201ENST00000568688 1174 ntBASIC4.37□□□□□ -1.71
VTNP04004 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.37□□□□□ -1.71
VTNP04004 AC126365.2-201ENST00000580630 379 ntBASIC4.37□□□□□ -1.71
VTNP04004 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.37□□□□□ -1.71
VTNP04004 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.37□□□□□ -1.71
VTNP04004 RMST_10.1-201ENST00000616309 154 ntBASIC4.37□□□□□ -1.71
VTNP04004 CR392039.5-201ENST00000623201 510 ntBASIC4.37□□□□□ -1.71
VTNP04004 AC073530.2-201ENST00000623987 261 ntBASIC4.37□□□□□ -1.71
VTNP04004 OR8B1P-202ENST00000641132 1178 ntBASIC4.37□□□□□ -1.71
VTNP04004 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
VTNP04004 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.37□□□□□ -1.71
VTNP04004 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.37□□□□□ -1.71
VTNP04004 AC005332.5-201ENST00000591222 2919 ntBASIC4.37□□□□□ -1.71
VTNP04004 SCN1A-220ENST00000641603 12506 ntBASIC4.37□□□□□ -1.71
VTNP04004 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VTNP04004 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.36□□□□□ -1.71
VTNP04004 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.36□□□□□ -1.71
VTNP04004 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.36□□□□□ -1.71
VTNP04004 PTMAP2-201ENST00000397627 327 ntBASIC4.36□□□□□ -1.71
VTNP04004 VDAC2P1-201ENST00000399358 958 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC010385.1-201ENST00000412374 256 ntBASIC4.36□□□□□ -1.71
VTNP04004 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.36□□□□□ -1.71
VTNP04004 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.36□□□□□ -1.71
VTNP04004 CYCSP10-201ENST00000417973 294 ntBASIC4.36□□□□□ -1.71
VTNP04004 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.36□□□□□ -1.71
VTNP04004 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.36□□□□□ -1.71
VTNP04004 AC011242.1-201ENST00000433596 1158 ntBASIC4.36□□□□□ -1.71
VTNP04004 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.36□□□□□ -1.71
VTNP04004 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VTNP04004 MTATP6P14-201ENST00000455189 673 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.36□□□□□ -1.71
VTNP04004 RNU7-27P-201ENST00000459281 62 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC006517.1-201ENST00000480485 328 ntBASIC4.36□□□□□ -1.71
VTNP04004 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.36□□□□□ -1.71
VTNP04004 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VTNP04004 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.36□□□□□ -1.71
VTNP04004 RNU6-1004P-201ENST00000516584 111 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms