Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL035404.1-201ENST00000497982 568 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 FTH1P24-201ENST00000503502 462 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 MTATP6P22-201ENST00000507369 598 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC026784.1-201ENST00000507986 352 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 SNORA76.2-201ENST00000517095 137 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 IGLVIV-65-201ENST00000517313 360 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 HMGB1P23-201ENST00000518743 568 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL139174.1-201ENST00000531489 886 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL121576.1-201ENST00000556055 276 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 CYP2C60P-201ENST00000566088 139 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC022968.1-201ENST00000567372 442 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 MIR4425-201ENST00000580572 84 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC011477.5-201ENST00000586571 259 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 PCNAP1-202ENST00000595299 752 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC073091.2-201ENST00000603205 907 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC079880.2-201ENST00000603790 1213 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC079610.2-201ENST00000604818 690 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL451044.1-201ENST00000604867 238 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC020923.1-201ENST00000624021 917 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC073342.3-201ENST00000624211 193 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC083865.1-201ENST00000636634 831 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC008013.2-202ENST00000637965 364 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 RIOK3P1-201ENST00000418778 1528 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RNU6-543P-201ENST00000362576 108 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RPS16P5-201ENST00000406501 404 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 SNRPFP1-201ENST00000414761 252 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC119751.6-201ENST00000416712 186 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 MTND2P15-201ENST00000418575 892 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 MTATP6P11-201ENST00000428071 670 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RPL23AP46-201ENST00000438548 490 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC083863.1-201ENST00000438811 231 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RPS29P31-201ENST00000446147 164 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 CYCSP42-201ENST00000450823 238 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 CEACAMP6-201ENST00000452007 574 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC098824.1-201ENST00000453565 980 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC010326.1-201ENST00000462726 602 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC053481.1-201ENST00000467217 306 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC093720.1-201ENST00000505681 714 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RNU7-143P-201ENST00000516781 65 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC090751.1-201ENST00000566966 267 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC012417.1-201ENST00000582307 1039 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC012254.4-201ENST00000588843 273 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 VN1R84P-201ENST00000593697 235 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AF230666.2-201ENST00000602328 725 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 BRDTP1-201ENST00000605735 677 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC116651.1-201ENST00000609724 556 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 RMST_8.1-201ENST00000610287 165 ntBASIC3.01□□□□□ -1.93
HLA-DQA1P01909 AC008121.2-201ENST00000614647 523 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms