Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL591034.3-201ENST00000605511 685 ntBASIC3.86□□□□□ -1.79
HCN1O60741 AC004943.3-201ENST00000624116 600 ntBASIC3.86□□□□□ -1.79
HCN1O60741 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HCN1O60741 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HCN1O60741 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.86□□□□□ -1.79
HCN1O60741 MAPK10-373ENST00000641983 6772 ntBASIC3.86□□□□□ -1.79
HCN1O60741 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HCN1O60741 AC008725.1-201ENST00000605123 2263 ntBASIC3.85□□□□□ -1.79
HCN1O60741 RNU1-87P-201ENST00000363727 170 ntBASIC3.85□□□□□ -1.79
HCN1O60741 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.85□□□□□ -1.79
HCN1O60741 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HCN1O60741 TAF9BP2-201ENST00000400856 499 ntBASIC3.85□□□□□ -1.79
HCN1O60741 RNA5SP317-201ENST00000410176 116 ntBASIC3.85□□□□□ -1.79
HCN1O60741 RNA5SP311-201ENST00000411290 116 ntBASIC3.85□□□□□ -1.79
HCN1O60741 AMD1P2-201ENST00000412936 992 ntBASIC3.85□□□□□ -1.79
HCN1O60741 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN1O60741 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN1O60741 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN1O60741 AC092832.1-201ENST00000422934 400 ntBASIC3.85□□□□□ -1.79
HCN1O60741 COX6B1P7-201ENST00000430845 235 ntBASIC3.85□□□□□ -1.79
HCN1O60741 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN1O60741 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.85□□□□□ -1.79
HCN1O60741 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN1O60741 PPIAP17-201ENST00000438507 471 ntBASIC3.85□□□□□ -1.79
HCN1O60741 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN1O60741 TPTE2P3-201ENST00000441562 1189 ntBASIC3.85□□□□□ -1.79
HCN1O60741 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.85□□□□□ -1.79
HCN1O60741 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN1O60741 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.85□□□□□ -1.79
HCN1O60741 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN1O60741 TPMTP4-201ENST00000450749 678 ntBASIC3.85□□□□□ -1.79
HCN1O60741 AC007688.1-201ENST00000475592 759 ntBASIC3.85□□□□□ -1.79
HCN1O60741 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN1O60741 OR5H4P-201ENST00000510851 923 ntBASIC3.85□□□□□ -1.79
HCN1O60741 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 RNA5SP315-201ENST00000516340 116 ntBASIC3.85□□□□□ -1.79
HCN1O60741 RNA5SP519-201ENST00000516480 119 ntBASIC3.85□□□□□ -1.79
HCN1O60741 SNORA31.13-201ENST00000516624 135 ntBASIC3.85□□□□□ -1.79
HCN1O60741 RNA5SP312-201ENST00000517068 116 ntBASIC3.85□□□□□ -1.79
HCN1O60741 AC063950.1-201ENST00000552036 308 ntBASIC3.85□□□□□ -1.79
HCN1O60741 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.85□□□□□ -1.79
HCN1O60741 AC106785.3-201ENST00000564064 847 ntBASIC3.85□□□□□ -1.79
HCN1O60741 AC233266.2-201ENST00000567067 528 ntBASIC3.85□□□□□ -1.79
HCN1O60741 AC015911.5-201ENST00000587076 451 ntBASIC3.85□□□□□ -1.79
HCN1O60741 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN1O60741 AL354984.3-201ENST00000604803 325 ntBASIC3.85□□□□□ -1.79
HCN1O60741 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 AC015726.3-201ENST00000624501 418 ntBASIC3.85□□□□□ -1.79
HCN1O60741 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN1O60741 AC091948.2-201ENST00000636510 279 ntBASIC3.85□□□□□ -1.79
HCN1O60741 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.85□□□□□ -1.79
HCN1O60741 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
HCN1O60741 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HCN1O60741 AC092162.3-201ENST00000624511 1624 ntBASIC3.84□□□□□ -1.79
HCN1O60741 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.84□□□□□ -1.79
HCN1O60741 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
HCN1O60741 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HCN1O60741 LINC02471-203ENST00000641941 4752 ntBASIC3.84□□□□□ -1.79
HCN1O60741 ZNF90P1-201ENST00000480493 1951 ntBASIC3.84□□□□□ -1.79
HCN1O60741 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
HCN1O60741 AC007685.1-201ENST00000329806 452 ntBASIC3.84□□□□□ -1.79
HCN1O60741 RNA5SP479-201ENST00000364858 117 ntBASIC3.84□□□□□ -1.79
HCN1O60741 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
HCN1O60741 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HCN1O60741 SNORA3C-201ENST00000408792 125 ntBASIC3.84□□□□□ -1.79
HCN1O60741 MTATP6P19-201ENST00000413797 659 ntBASIC3.84□□□□□ -1.79
HCN1O60741 XKRYP4-201ENST00000414395 483 ntBASIC3.84□□□□□ -1.79
HCN1O60741 LINC01881-201ENST00000416103 412 ntBASIC3.84□□□□□ -1.79
HCN1O60741 MTCO3P4-201ENST00000419236 787 ntBASIC3.84□□□□□ -1.79
HCN1O60741 CYP4F29P-201ENST00000420685 446 ntBASIC3.84□□□□□ -1.79
HCN1O60741 MRPL50P1-201ENST00000431951 384 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN1O60741 MTND4P15-201ENST00000437913 1033 ntBASIC3.84□□□□□ -1.79
HCN1O60741 RPL23AP46-201ENST00000438548 490 ntBASIC3.84□□□□□ -1.79
HCN1O60741 CBX1P4-201ENST00000439415 457 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AL356535.1-201ENST00000440335 398 ntBASIC3.84□□□□□ -1.79
HCN1O60741 MTCYBP21-201ENST00000443300 1113 ntBASIC3.84□□□□□ -1.79
HCN1O60741 XKRYP5-201ENST00000449659 483 ntBASIC3.84□□□□□ -1.79
HCN1O60741 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.84□□□□□ -1.79
HCN1O60741 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN1O60741 HMGB1P21-201ENST00000502313 581 ntBASIC3.84□□□□□ -1.79
HCN1O60741 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN1O60741 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN1O60741 COL6A4P2-205ENST00000509855 506 ntBASIC3.84□□□□□ -1.79
HCN1O60741 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.84□□□□□ -1.79
HCN1O60741 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.84□□□□□ -1.79
HCN1O60741 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.84□□□□□ -1.79
HCN1O60741 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN1O60741 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.84□□□□□ -1.79
HCN1O60741 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms