Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.11□□□□□ -1.75
SNX3O60493 AL020997.3-201ENST00000602843 359 ntBASIC4.11□□□□□ -1.75
SNX3O60493 AL512782.1-201ENST00000603093 364 ntBASIC4.11□□□□□ -1.75
SNX3O60493 AC002487.1-201ENST00000604565 994 ntBASIC4.11□□□□□ -1.75
SNX3O60493 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.11□□□□□ -1.75
SNX3O60493 AC009163.6-201ENST00000612367 342 ntBASIC4.11□□□□□ -1.75
SNX3O60493 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX3O60493 AL109659.3-201ENST00000624985 950 ntBASIC4.11□□□□□ -1.75
SNX3O60493 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SNX3O60493 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SNX3O60493 ASNSP1-201ENST00000518311 1939 ntBASIC4.11□□□□□ -1.75
SNX3O60493 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX3O60493 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SNX3O60493 RNA5SP391-201ENST00000363456 119 ntBASIC4.1□□□□□ -1.75
SNX3O60493 RNU1-130P-201ENST00000363930 160 ntBASIC4.1□□□□□ -1.75
SNX3O60493 RNA5SP435-201ENST00000364044 108 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 OR1L1-202ENST00000373686 1083 ntBASIC4.1□□□□□ -1.75
SNX3O60493 HNRNPDP2-201ENST00000406475 478 ntBASIC4.1□□□□□ -1.75
SNX3O60493 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SNX3O60493 RNU6-272P-201ENST00000411028 104 ntBASIC4.1□□□□□ -1.75
SNX3O60493 RPS7P9-201ENST00000414704 586 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AL449283.1-202ENST00000418249 604 ntBASIC4.1□□□□□ -1.75
SNX3O60493 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX3O60493 PAICSP7-201ENST00000419829 962 ntBASIC4.1□□□□□ -1.75
SNX3O60493 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX3O60493 AC007394.1-201ENST00000421941 531 ntBASIC4.1□□□□□ -1.75
SNX3O60493 MTCO2P23-201ENST00000425216 680 ntBASIC4.1□□□□□ -1.75
SNX3O60493 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX3O60493 MTCO1P53-201ENST00000441633 699 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX3O60493 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SNX3O60493 AC233982.1-201ENST00000451247 436 ntBASIC4.1□□□□□ -1.75
SNX3O60493 DHFRP3-201ENST00000455595 559 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AC018638.3-201ENST00000461273 132 ntBASIC4.1□□□□□ -1.75
SNX3O60493 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX3O60493 RN7SL30P-201ENST00000488416 306 ntBASIC4.1□□□□□ -1.75
SNX3O60493 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.1□□□□□ -1.75
SNX3O60493 AC106872.4-201ENST00000510050 523 ntBASIC4.1□□□□□ -1.75
SNX3O60493 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 snoZ278.1-201ENST00000517059 112 ntBASIC4.1□□□□□ -1.75
SNX3O60493 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.1□□□□□ -1.75
SNX3O60493 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AC004217.3-201ENST00000551552 878 ntBASIC4.1□□□□□ -1.75
SNX3O60493 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.1□□□□□ -1.75
SNX3O60493 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX3O60493 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX3O60493 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX3O60493 AP001160.4-201ENST00000596971 382 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AC091488.1-201ENST00000604239 660 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AC112220.2-201ENST00000605513 533 ntBASIC4.1□□□□□ -1.75
SNX3O60493 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 CYCSP41-201ENST00000616920 296 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AC243756.2-201ENST00000618406 463 ntBASIC4.1□□□□□ -1.75
SNX3O60493 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX3O60493 AP002799.1-201ENST00000623552 423 ntBASIC4.1□□□□□ -1.75
SNX3O60493 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX3O60493 MIR4302-201ENST00000638058 60 ntBASIC4.1□□□□□ -1.75
SNX3O60493 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX3O60493 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX3O60493 RPS4XP5-202ENST00000449995 1334 ntBASIC4.1□□□□□ -1.75
SNX3O60493 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.1□□□□□ -1.75
SNX3O60493 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SNX3O60493 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.1□□□□□ -1.75
SNX3O60493 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SNX3O60493 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX3O60493 AC016716.1-201ENST00000265882 708 ntBASIC4.09□□□□□ -1.75
SNX3O60493 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SNX3O60493 ANKRD36P1-201ENST00000344424 659 ntBASIC4.09□□□□□ -1.75
SNX3O60493 RNA5SP123-201ENST00000363244 119 ntBASIC4.09□□□□□ -1.75
SNX3O60493 U8.4-201ENST00000363626 134 ntBASIC4.09□□□□□ -1.75
SNX3O60493 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SNX3O60493 AL391361.1-201ENST00000405580 489 ntBASIC4.09□□□□□ -1.75
SNX3O60493 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX3O60493 RNU6-575P-201ENST00000411326 105 ntBASIC4.09□□□□□ -1.75
SNX3O60493 RN7SKP273-201ENST00000411392 314 ntBASIC4.09□□□□□ -1.75
SNX3O60493 EIF4A1P3-201ENST00000411521 244 ntBASIC4.09□□□□□ -1.75
SNX3O60493 FAR2P2-201ENST00000413041 594 ntBASIC4.09□□□□□ -1.75
SNX3O60493 MTND4P3-201ENST00000417829 541 ntBASIC4.09□□□□□ -1.75
SNX3O60493 AC093162.1-201ENST00000419682 124 ntBASIC4.09□□□□□ -1.75
SNX3O60493 OSTCP5-201ENST00000425293 453 ntBASIC4.09□□□□□ -1.75
SNX3O60493 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX3O60493 C1DP1-201ENST00000426049 402 ntBASIC4.09□□□□□ -1.75
SNX3O60493 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SNX3O60493 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX3O60493 NPM1P34-201ENST00000428821 893 ntBASIC4.09□□□□□ -1.75
SNX3O60493 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.09□□□□□ -1.75
SNX3O60493 EXOSC3P1-201ENST00000448649 500 ntBASIC4.09□□□□□ -1.75
SNX3O60493 snoU13.20-201ENST00000459180 104 ntBASIC4.09□□□□□ -1.75
SNX3O60493 RPL7AP6-201ENST00000477943 801 ntBASIC4.09□□□□□ -1.75
SNX3O60493 AC126121.1-201ENST00000482313 553 ntBASIC4.09□□□□□ -1.75
SNX3O60493 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.09□□□□□ -1.75
SNX3O60493 RPL7L1P13-201ENST00000511702 739 ntBASIC4.09□□□□□ -1.75
SNX3O60493 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.09□□□□□ -1.75
SNX3O60493 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 458.3 ms