Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MTND4P3-201ENST00000417829 541 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.64□□□□□ -1.67
SMAD6O43541 AL732292.1-201ENST00000426692 226 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 FTH1P16-201ENST00000435241 552 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.64□□□□□ -1.67
SMAD6O43541 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.64□□□□□ -1.67
SMAD6O43541 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 MRPL48P1-201ENST00000445390 636 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC104978.1-201ENST00000449387 391 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AL162591.2-201ENST00000449634 317 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AL935212.3-201ENST00000450729 284 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 NPM1P13-201ENST00000452663 865 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC092754.2-201ENST00000463506 460 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 MTND6P6-201ENST00000478031 263 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC013356.1-201ENST00000489027 564 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.64□□□□□ -1.67
SMAD6O43541 AC091860.1-201ENST00000505723 432 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.64□□□□□ -1.67
SMAD6O43541 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.64□□□□□ -1.67
SMAD6O43541 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.64□□□□□ -1.67
SMAD6O43541 RNA5SP464-201ENST00000516251 108 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.64□□□□□ -1.67
SMAD6O43541 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.64□□□□□ -1.67
SMAD6O43541 NDUFS5P6-201ENST00000529136 295 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 RFPL1S-203ENST00000539579 330 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.64□□□□□ -1.67
SMAD6O43541 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.64□□□□□ -1.67
SMAD6O43541 AL354943.1-201ENST00000572103 781 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC012213.3-201ENST00000577199 777 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 MIR4789-201ENST00000577469 82 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 RN7SL622P-201ENST00000585292 275 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 RPL26P30-202ENST00000602923 645 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC004987.4-201ENST00000603383 338 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC115286.1-201ENST00000604298 434 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 AC006338.2-201ENST00000616864 791 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC010975.3-201ENST00000618727 978 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 AC073530.2-201ENST00000623987 261 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 AC019080.5-201ENST00000624891 757 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SMAD6O43541 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SMAD6O43541 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 AL592437.2-201ENST00000421655 2434 ntBASIC4.64□□□□□ -1.67
SMAD6O43541 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SMAD6O43541 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SMAD6O43541 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SMAD6O43541 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SMAD6O43541 AL355852.1-201ENST00000454081 1771 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SMAD6O43541 NEAT1-202ENST00000501122 22743 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 RNU1-83P-201ENST00000363426 164 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.63□□□□□ -1.67
SMAD6O43541 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SMAD6O43541 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.63□□□□□ -1.67
SMAD6O43541 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.63□□□□□ -1.67
SMAD6O43541 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.63□□□□□ -1.67
SMAD6O43541 ELOCP9-201ENST00000418624 239 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 EIF4A1P1-201ENST00000420241 934 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 AL365203.2-201ENST00000423444 196 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AP001324.1-201ENST00000428553 399 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AC016712.1-201ENST00000431088 378 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AC068135.1-201ENST00000446164 246 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.63□□□□□ -1.67
SMAD6O43541 CYCSP34-201ENST00000458172 304 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 RPL21P126-201ENST00000470049 478 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 MTND3P7-201ENST00000474435 343 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 AC002456.2-201ENST00000509356 380 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 OR51K1P-201ENST00000510214 950 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 RN7SKP46-201ENST00000515942 234 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.63□□□□□ -1.67
SMAD6O43541 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.63□□□□□ -1.67
SMAD6O43541 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SMAD6O43541 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.63□□□□□ -1.67
SMAD6O43541 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.63□□□□□ -1.67
SMAD6O43541 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.63□□□□□ -1.67
SMAD6O43541 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.63□□□□□ -1.67
SMAD6O43541 AC135628.1-201ENST00000568867 534 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 CBX3P2-202ENST00000583365 535 ntBASIC4.63□□□□□ -1.67
SMAD6O43541 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.63□□□□□ -1.67
SMAD6O43541 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms