Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLDN3O15551 RN7SKP280-201ENST00000364196 304 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 SNORD51.1-201ENST00000365405 77 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 RPL23AP48-201ENST00000406913 488 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN3O15551 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN3O15551 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN3O15551 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN3O15551 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN3O15551 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN3O15551 VN1R25P-201ENST00000443385 738 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN3O15551 AL451050.1-201ENST00000450126 415 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 NDUFS5P3-201ENST00000450668 321 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 AL513343.1-201ENST00000451818 792 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 VN1R40P-201ENST00000455196 941 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 RPL37P3-201ENST00000456825 293 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 RN7SL132P-201ENST00000478131 296 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 RPS26P15-201ENST00000488067 348 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 FTH1P24-201ENST00000503502 462 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN3O15551 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN3O15551 YPEL5P3-201ENST00000547227 352 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN3O15551 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.32□□□□□ -1.72
CLDN3O15551 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN3O15551 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN3O15551 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN3O15551 AC005255.1-201ENST00000593748 216 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 AL020997.2-201ENST00000602607 184 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 ABI1P1-201ENST00000603375 1120 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 AC069304.3-201ENST00000603938 1084 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 AC010680.3-201ENST00000604215 520 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN3O15551 AL645927.2-201ENST00000618350 349 ntBASIC4.32□□□□□ -1.72
CLDN3O15551 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN3O15551 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLDN3O15551 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN3O15551 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CLDN3O15551 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN3O15551 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN3O15551 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLDN3O15551 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 MTND4P26-201ENST00000415971 1359 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN3O15551 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CLDN3O15551 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 RNU6-213P-201ENST00000384051 104 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN3O15551 RPL7P2-201ENST00000427639 268 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN3O15551 TPTE2P3-201ENST00000441562 1189 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 AC097499.1-201ENST00000444277 208 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.31□□□□□ -1.72
CLDN3O15551 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN3O15551 MTND5P8-201ENST00000449817 1083 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 AL672167.3-201ENST00000465951 960 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 AC025181.1-201ENST00000477507 416 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CLDN3O15551 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN3O15551 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 CKS1BP1-201ENST00000555221 240 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 GNRHR2P1-201ENST00000555315 631 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 AL161713.1-201ENST00000555538 145 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN3O15551 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.31□□□□□ -1.72
CLDN3O15551 AP000255.1-201ENST00000610276 676 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 AC025016.1-201ENST00000616746 682 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN3O15551 AC012020.1-201ENST00000624541 1728 ntBASIC4.31□□□□□ -1.72
CLDN3O15551 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN3O15551 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CLDN3O15551 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN3O15551 AC007529.1-201ENST00000418574 2178 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN3O15551 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN3O15551 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLDN3O15551 LINC01347-201ENST00000417964 355 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 MTND2P15-201ENST00000418575 892 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 Z97055.1-201ENST00000419730 712 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN3O15551 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN3O15551 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN3O15551 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN3O15551 RPL7P29-201ENST00000437151 728 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 AC083863.1-201ENST00000438811 231 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 MTND2P25-201ENST00000449028 610 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN3O15551 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN3O15551 RPL21P11-201ENST00000461458 483 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 PPIAP15-201ENST00000479662 484 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 RPL31P61-201ENST00000496160 376 ntBASIC4.3□□□□□ -1.72
CLDN3O15551 MTATP6P22-201ENST00000507369 598 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms