Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AC008885.1-201ENST00000514930 301 ntBASIC3.8□□□□□ -1.8
CEP290O15078 AC008694.2-201ENST00000517591 306 ntBASIC3.8□□□□□ -1.8
CEP290O15078 AC018442.3-201ENST00000523025 183 ntBASIC3.8□□□□□ -1.8
CEP290O15078 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.8□□□□□ -1.8
CEP290O15078 AC095038.2-201ENST00000621464 1070 ntBASIC3.8□□□□□ -1.8
CEP290O15078 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.8□□□□□ -1.8
CEP290O15078 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.8□□□□□ -1.8
CEP290O15078 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CEP290O15078 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.8□□□□□ -1.8
CEP290O15078 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CEP290O15078 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CEP290O15078 AF228730.2-201ENST00000438784 848 ntBASIC3.79□□□□□ -1.8
CEP290O15078 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.79□□□□□ -1.8
CEP290O15078 AL109933.2-201ENST00000452651 260 ntBASIC3.79□□□□□ -1.8
CEP290O15078 AC022080.3-201ENST00000544433 482 ntBASIC3.79□□□□□ -1.8
CEP290O15078 HIGD1AP1-201ENST00000550979 275 ntBASIC3.79□□□□□ -1.8
CEP290O15078 AL079305.1-201ENST00000623159 3008 ntBASIC3.79□□□□□ -1.8
CEP290O15078 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.79□□□□□ -1.8
CEP290O15078 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.79□□□□□ -1.8
CEP290O15078 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.79□□□□□ -1.8
CEP290O15078 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CEP290O15078 AC073073.2-201ENST00000609827 2578 ntBASIC3.79□□□□□ -1.8
CEP290O15078 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CEP290O15078 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CEP290O15078 OR5J1P-201ENST00000313544 939 ntBASIC3.79□□□□□ -1.8
CEP290O15078 SNORA7.4-201ENST00000384249 137 ntBASIC3.79□□□□□ -1.8
CEP290O15078 AL445529.1-201ENST00000398713 389 ntBASIC3.79□□□□□ -1.8
CEP290O15078 NPM1P11-201ENST00000417106 855 ntBASIC3.79□□□□□ -1.8
CEP290O15078 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.79□□□□□ -1.8
CEP290O15078 PSMC1P13-201ENST00000458195 985 ntBASIC3.79□□□□□ -1.8
CEP290O15078 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.79□□□□□ -1.8
CEP290O15078 AP003355.3-201ENST00000623465 114 ntBASIC3.79□□□□□ -1.8
CEP290O15078 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.79□□□□□ -1.8
CEP290O15078 AC139713.2-210ENST00000641741 992 ntBASIC3.79□□□□□ -1.8
CEP290O15078 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CEP290O15078 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CEP290O15078 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.78□□□□□ -1.8
CEP290O15078 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CEP290O15078 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CEP290O15078 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CEP290O15078 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CEP290O15078 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.78□□□□□ -1.8
CEP290O15078 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.78□□□□□ -1.8
CEP290O15078 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.78□□□□□ -1.8
CEP290O15078 TOMM20P4-201ENST00000427861 435 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.78□□□□□ -1.8
CEP290O15078 TXNP1-201ENST00000441872 371 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.78□□□□□ -1.8
CEP290O15078 AC090151.1-201ENST00000520784 730 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.78□□□□□ -1.8
CEP290O15078 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.78□□□□□ -1.8
CEP290O15078 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CEP290O15078 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.78□□□□□ -1.8
CEP290O15078 AC092376.2-201ENST00000622621 4116 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.78□□□□□ -1.8
CEP290O15078 AL135938.1-201ENST00000443141 297 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.78□□□□□ -1.8
CEP290O15078 SLC31A1P1-201ENST00000451221 567 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.78□□□□□ -1.8
CEP290O15078 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CEP290O15078 SUMO2P19-201ENST00000518920 295 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AP001207.2-201ENST00000519490 539 ntBASIC3.78□□□□□ -1.8
CEP290O15078 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
CEP290O15078 AC007599.1-201ENST00000568688 1174 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AC090312.2-201ENST00000582687 378 ntBASIC3.78□□□□□ -1.8
CEP290O15078 AC073657.2-201ENST00000605661 303 ntBASIC3.78□□□□□ -1.8
CEP290O15078 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.77□□□□□ -1.81
CEP290O15078 MTHFD2P2-201ENST00000407725 247 ntBASIC3.77□□□□□ -1.81
CEP290O15078 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC3.77□□□□□ -1.81
CEP290O15078 AL353678.1-201ENST00000422735 741 ntBASIC3.77□□□□□ -1.81
CEP290O15078 SKP1P3-201ENST00000429280 487 ntBASIC3.77□□□□□ -1.81
CEP290O15078 TRBV12-1-201ENST00000479785 344 ntBASIC3.77□□□□□ -1.81
CEP290O15078 AC010374.2-201ENST00000512933 535 ntBASIC3.77□□□□□ -1.81
CEP290O15078 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.77□□□□□ -1.81
CEP290O15078 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CEP290O15078 AC127024.5-201ENST00000580085 462 ntBASIC3.77□□□□□ -1.81
CEP290O15078 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.77□□□□□ -1.81
CEP290O15078 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.77□□□□□ -1.81
CEP290O15078 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CEP290O15078 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CEP290O15078 AC067945.1-201ENST00000342609 618 ntBASIC3.77□□□□□ -1.81
CEP290O15078 RPL7P47-201ENST00000497299 556 ntBASIC3.77□□□□□ -1.81
CEP290O15078 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.77□□□□□ -1.81
CEP290O15078 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.77□□□□□ -1.81
CEP290O15078 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.77□□□□□ -1.81
CEP290O15078 Z83843.1-201ENST00000604070 3685 ntBASIC3.77□□□□□ -1.81
CEP290O15078 AL591424.2-201ENST00000617023 128 ntBASIC3.77□□□□□ -1.81
CEP290O15078 AC005086.4-201ENST00000623065 213 ntBASIC3.77□□□□□ -1.81
CEP290O15078 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC3.76□□□□□ -1.81
CEP290O15078 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CEP290O15078 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CEP290O15078 MIR504-201ENST00000385065 83 ntBASIC3.76□□□□□ -1.81
CEP290O15078 AL139281.1-201ENST00000422120 335 ntBASIC3.76□□□□□ -1.81
CEP290O15078 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.76□□□□□ -1.81
CEP290O15078 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CEP290O15078 AC067852.3-201ENST00000589177 561 ntBASIC3.76□□□□□ -1.81
CEP290O15078 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.76□□□□□ -1.81
CEP290O15078 RNVU1-4-201ENST00000612985 164 ntBASIC3.76□□□□□ -1.81
CEP290O15078 AC079777.1-201ENST00000623836 1953 ntBASIC3.76□□□□□ -1.81
CEP290O15078 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms