Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
O00370 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
O00370 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.46□□□□□ -1.7
O00370 AC090229.1-201ENST00000590983 1609 ntBASIC4.46□□□□□ -1.7
O00370 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 ZNF962P-201ENST00000443465 3140 ntBASIC4.45□□□□□ -1.7
O00370 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.45□□□□□ -1.7
O00370 RPL32P3-201ENST00000359025 275 ntBASIC4.45□□□□□ -1.7
O00370 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
O00370 RN7SKP182-201ENST00000410772 298 ntBASIC4.45□□□□□ -1.7
O00370 RNA5SP306-201ENST00000411087 107 ntBASIC4.45□□□□□ -1.7
O00370 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.45□□□□□ -1.7
O00370 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.45□□□□□ -1.7
O00370 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.45□□□□□ -1.7
O00370 AC092017.2-201ENST00000427600 362 ntBASIC4.45□□□□□ -1.7
O00370 FO393414.1-201ENST00000428697 1184 ntBASIC4.45□□□□□ -1.7
O00370 COX6B1P7-201ENST00000430845 235 ntBASIC4.45□□□□□ -1.7
O00370 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 AC091390.1-201ENST00000433904 331 ntBASIC4.45□□□□□ -1.7
O00370 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 RNA5SP246-201ENST00000458909 119 ntBASIC4.45□□□□□ -1.7
O00370 AC008379.1-201ENST00000463655 464 ntBASIC4.45□□□□□ -1.7
O00370 AC105137.1-201ENST00000484355 562 ntBASIC4.45□□□□□ -1.7
O00370 AC104687.1-201ENST00000485829 412 ntBASIC4.45□□□□□ -1.7
O00370 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.45□□□□□ -1.7
O00370 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 AC010285.3-201ENST00000511668 676 ntBASIC4.45□□□□□ -1.7
O00370 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.45□□□□□ -1.7
O00370 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 AC105233.3-201ENST00000531125 744 ntBASIC4.45□□□□□ -1.7
O00370 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.45□□□□□ -1.7
O00370 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.45□□□□□ -1.7
O00370 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.45□□□□□ -1.7
O00370 AC069366.1-201ENST00000583159 838 ntBASIC4.45□□□□□ -1.7
O00370 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.45□□□□□ -1.7
O00370 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.45□□□□□ -1.7
O00370 ARF4P1-201ENST00000605447 541 ntBASIC4.45□□□□□ -1.7
O00370 OR6R2P-201ENST00000609216 300 ntBASIC4.45□□□□□ -1.7
O00370 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 AL359715.5-201ENST00000623431 443 ntBASIC4.45□□□□□ -1.7
O00370 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
O00370 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
O00370 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.45□□□□□ -1.7
O00370 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 AC008432.1-201ENST00000615912 1320 ntBASIC4.45□□□□□ -1.7
O00370 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
O00370 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.45□□□□□ -1.7
O00370 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
O00370 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
O00370 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
O00370 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.44□□□□□ -1.7
O00370 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.44□□□□□ -1.7
O00370 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.44□□□□□ -1.7
O00370 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
O00370 AC017007.4-201ENST00000503353 1352 ntBASIC4.44□□□□□ -1.7
O00370 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
O00370 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
O00370 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
O00370 ZNF603P-201ENST00000405613 487 ntBASIC4.44□□□□□ -1.7
O00370 RAC1P3-201ENST00000416129 580 ntBASIC4.44□□□□□ -1.7
O00370 AL391219.1-201ENST00000422570 483 ntBASIC4.44□□□□□ -1.7
O00370 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.44□□□□□ -1.7
O00370 AC234779.1-201ENST00000425910 285 ntBASIC4.44□□□□□ -1.7
O00370 AC011242.1-201ENST00000433596 1158 ntBASIC4.44□□□□□ -1.7
O00370 TPTE2P6-202ENST00000445572 1007 ntBASIC4.44□□□□□ -1.7
O00370 AL096829.2-201ENST00000446582 742 ntBASIC4.44□□□□□ -1.7
O00370 HMGB3P22-202ENST00000451823 572 ntBASIC4.44□□□□□ -1.7
O00370 FCF1P6-201ENST00000456841 595 ntBASIC4.44□□□□□ -1.7
O00370 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.44□□□□□ -1.7
O00370 AC093267.1-201ENST00000489176 961 ntBASIC4.44□□□□□ -1.7
O00370 RPS27AP13-201ENST00000498403 237 ntBASIC4.44□□□□□ -1.7
O00370 AC025554.1-201ENST00000505641 188 ntBASIC4.44□□□□□ -1.7
O00370 RN7SKP122-201ENST00000515923 296 ntBASIC4.44□□□□□ -1.7
O00370 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.44□□□□□ -1.7
O00370 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.44□□□□□ -1.7
O00370 AP000916.1-201ENST00000533869 835 ntBASIC4.44□□□□□ -1.7
O00370 AC025260.1-201ENST00000548858 430 ntBASIC4.44□□□□□ -1.7
O00370 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.44□□□□□ -1.7
O00370 AL109741.3-201ENST00000561748 592 ntBASIC4.44□□□□□ -1.7
O00370 AL360157.1-201ENST00000565962 87 ntBASIC4.44□□□□□ -1.7
O00370 AC022655.2-201ENST00000577280 318 ntBASIC4.44□□□□□ -1.7
O00370 MIR3939-201ENST00000582614 106 ntBASIC4.44□□□□□ -1.7
O00370 AC006116.5-201ENST00000591936 559 ntBASIC4.44□□□□□ -1.7
O00370 AC133794.1-201ENST00000602731 914 ntBASIC4.44□□□□□ -1.7
O00370 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.44□□□□□ -1.7
O00370 AC083809.1-201ENST00000615051 472 ntBASIC4.44□□□□□ -1.7
O00370 MIR8059-201ENST00000620427 81 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms