Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AP001486.2-201ENST00000561652 5113 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 AC008432.1-201ENST00000615912 1320 ntBASIC3.93□□□□□ -1.78
NPIPA2E9PIF3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 RNU6-543P-201ENST00000362576 108 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 HMGB3P31-201ENST00000413333 595 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 UBTFL3-201ENST00000418934 1024 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC114814.2-201ENST00000419195 485 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 RPL7P28-201ENST00000437739 740 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC114495.1-201ENST00000441274 436 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 RPL5P32-201ENST00000454085 879 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC005008.1-201ENST00000456151 612 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 RPS7P7-201ENST00000463499 571 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC020898.1-201ENST00000474167 787 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 UBTFL6-201ENST00000477929 1024 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 RPL35P6-201ENST00000490024 372 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 MTCO2P9-201ENST00000503214 694 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC112518.2-201ENST00000508565 425 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC010306.1-201ENST00000523223 1117 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC106734.1-201ENST00000568646 663 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AP000919.1-202ENST00000581139 1264 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 SLC25A36P1-201ENST00000590111 465 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 VN1R85P-201ENST00000601587 426 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC125494.3-201ENST00000602759 455 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC092574.1-201ENST00000609771 420 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 AC023509.5-201ENST00000617434 807 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 DCAF13P3-201ENST00000561147 1334 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 MFSD8-213ENST00000641134 1327 ntBASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
NPIPA2E9PIF3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 RNA5SP391-201ENST00000363456 119 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 RNA5SP175-201ENST00000364275 119 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL022722.2-201ENST00000402519 180 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC008173.1-201ENST00000418901 264 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 MFSD13B-201ENST00000420133 1290 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL606495.1-201ENST00000422100 813 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 EIF1P3-201ENST00000423841 334 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 ETF1P3-201ENST00000430422 1160 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 UBE2V1P6-201ENST00000430840 422 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 MOB1AP2-201ENST00000446060 614 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC068135.1-201ENST00000446164 246 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 FABP3P2-201ENST00000453169 399 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 RPL35AP15-201ENST00000468042 339 ntBASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.91□□□□□ -1.78
NPIPA2E9PIF3 AC010374.1-201ENST00000503762 1237 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms