Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 RN7SL594P-201ENST00000470590 287 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 RN7SL132P-201ENST00000478131 296 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AP000563.1-201ENST00000490865 758 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 UBE2CP3-201ENST00000502715 450 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 NPM1P41-201ENST00000512920 831 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC136624.4-201ENST00000573044 370 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 VN1R79P-201ENST00000593540 513 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 BX323046.1-201ENST00000610145 535 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC116447.1-201ENST00000613153 453 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC099669.2-201ENST00000616549 437 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AC069209.1-201ENST00000619282 651 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 U7.8-201ENST00000619968 63 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.19□□□□□ -1.9
TRAV27A0A087WT01 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 XIAPP3-201ENST00000312918 795 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 FRG1CP-201ENST00000358464 769 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 MIR30E-201ENST00000362104 92 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 RNA5SP51-201ENST00000364750 119 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 MIR1183-201ENST00000408856 89 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 RN7SKP177-201ENST00000410567 355 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 RNU6-603P-201ENST00000411403 107 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AL357552.1-201ENST00000445254 415 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 SETP14-201ENST00000497538 873 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 RANP9-201ENST00000519957 271 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC109635.6-201ENST00000525487 1113 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 MTND2P17-201ENST00000550281 688 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AL121839.1-201ENST00000556233 1185 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC022916.3-201ENST00000592961 742 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AL049634.3-201ENST00000604968 457 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC092653.1-201ENST00000608509 531 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 RMST_8.1-201ENST00000610287 165 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC090337.1-201ENST00000579651 2074 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 AC092079.1-201ENST00000558620 1985 ntBASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.18□□□□□ -1.9
TRAV27A0A087WT01 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AC006042.3-201ENST00000454684 1469 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 SNORD9-201ENST00000362566 104 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AP002088.1-201ENST00000382740 395 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AL589994.1-201ENST00000404962 340 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AL138787.1-202ENST00000437804 898 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 ELOCP10-201ENST00000440624 327 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 RPS3AP46-201ENST00000448352 682 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AL354710.1-201ENST00000453641 246 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AC020893.1-201ENST00000502452 580 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 RN7SKP60-201ENST00000516985 239 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AL139174.1-201ENST00000531489 886 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 ELOCP34-201ENST00000604436 327 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AL365503.1-201ENST00000605247 905 ntBASIC3.17□□□□□ -1.9
TRAV27A0A087WT01 AC110741.2-201ENST00000605278 268 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms