Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 RNA5SP191-201ENST00000362585 102 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 MIR298-201ENST00000401212 88 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC016397.1-201ENST00000412463 242 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AL590139.1-201ENST00000416267 400 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 NPM1P11-201ENST00000417106 855 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 MTCYBP5-201ENST00000423752 1135 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 RPS20P1-201ENST00000434853 354 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 TXNP5-201ENST00000441043 315 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 GTF3AP5-201ENST00000442645 697 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 MED28P3-201ENST00000444288 531 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AL929288.2-201ENST00000446368 407 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 GAPDHP36-201ENST00000480688 918 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 CDH12P2-201ENST00000504393 298 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 NDUFA5P2-201ENST00000519723 344 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 MTCO1P40-201ENST00000574371 625 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC090948.2-201ENST00000607363 564 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC099676.1-201ENST00000608886 657 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC009704.2-201ENST00000618739 483 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AL356121.2-201ENST00000624715 780 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 MIR4278-201ENST00000636094 69 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC022893.2-201ENST00000564832 3296 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 AC138393.1-206ENST00000540997 1886 ntBASIC5.73□□□□□ -1.49
CTDP1Q9Y5B0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AP000776.1-201ENST00000530032 1663 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 OR56B2P-201ENST00000317102 954 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 RNU6-560P-201ENST00000364007 108 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC019155.1-201ENST00000382242 574 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 Y_RNA.553-201ENST00000384670 102 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 RNA5SP113-201ENST00000410486 84 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 ELOCP17-201ENST00000414751 326 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 CNOT7P1-201ENST00000429006 852 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 YWHAEP5-201ENST00000431545 765 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 RPS29P9-201ENST00000440360 171 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 CBX1P2-201ENST00000453841 458 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 HMGB1P4-201ENST00000455362 567 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 RNU6-1218P-201ENST00000458990 108 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AP000942.1-201ENST00000463969 747 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 CCDC75P1-201ENST00000469247 791 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC091959.2-201ENST00000477363 321 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 RN7SL441P-201ENST00000492388 296 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC005178.1-201ENST00000508392 440 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC092851.1-201ENST00000535964 478 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC044913.1-201ENST00000557200 430 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC006362.1-201ENST00000567392 174 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 MIR3912-201ENST00000577566 105 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AC022884.2-201ENST00000578535 580 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 AL031667.3-201ENST00000620124 655 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 MFSD8-245ENST00000641743 948 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 CASC19-206ENST00000641028 1430 ntBASIC5.72□□□□□ -1.49
CTDP1Q9Y5B0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms