Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC034159.1-201ENST00000513885 583 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 AC107953.1-201ENST00000522216 297 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 AC023050.3-201ENST00000541142 333 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 AC096996.1-201ENST00000563813 325 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 AC008966.2-201ENST00000606157 453 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 U1.31-201ENST00000620022 160 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 C2orf27A-204ENST00000623058 969 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 AC073365.1-203ENST00000641055 1992 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 AL606537.1-201ENST00000607258 2011 ntBASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ZC3H4Q9UPT8 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 OR5J1P-201ENST00000313544 939 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 RNA5SP183-201ENST00000362452 119 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 RNU105B-201ENST00000364478 208 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 SNORA4.3-201ENST00000365564 137 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AL451142.1-201ENST00000375867 775 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC009161.1-201ENST00000417306 376 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 RPS15AP30-201ENST00000420976 390 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 MTCO3P46-201ENST00000425787 232 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 OR7E116P-201ENST00000448529 957 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AL133244.1-201ENST00000456007 258 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 RNU6-261P-201ENST00000459506 102 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 RN7SL547P-201ENST00000490793 290 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 RPL17P2-201ENST00000491913 451 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 SCARNA6.1-201ENST00000516989 238 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 RNU6-1003P-201ENST00000517099 105 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC087241.2-201ENST00000535801 324 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC099489.2-201ENST00000574976 260 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 MIR3668-201ENST00000582138 75 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC078899.5-201ENST00000612475 178 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AC010149.2-201ENST00000637608 315 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 ASNSP1-204ENST00000641977 1664 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 AP005432.1-201ENST00000580891 3485 ntBASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ZC3H4Q9UPT8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 Y_RNA.315-201ENST00000365117 102 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 Y_RNA.422-201ENST00000384054 114 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 Y_RNA.474-201ENST00000384341 102 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 RNU1-149P-201ENST00000390870 161 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AL645733.1-201ENST00000402250 217 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 OR6E1P-201ENST00000414424 923 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 ELOCP4-201ENST00000420090 333 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 MTND6P18-201ENST00000439477 513 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 TRAPPC2P8-201ENST00000440676 396 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 RPL5P25-201ENST00000441148 775 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 CYCSP51-201ENST00000443545 318 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 RPS23P9-201ENST00000448848 438 ntBASIC7.29□□□□□ -1.24
ZC3H4Q9UPT8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms