Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC010266.2-201ENST00000564741 3255 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 MIR504-201ENST00000385065 83 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC004448.2-201ENST00000422360 586 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC099063.2-201ENST00000446360 662 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC010655.1-201ENST00000449336 292 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 OR5M7P-201ENST00000526140 972 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 MIR4319-201ENST00000577285 85 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC009464.1-201ENST00000615731 469 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 AC127502.3-201ENST00000636170 1206 ntBASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.61□□□□□ -1.51
RIMBP3Q9UFD9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AL391417.1-201ENST00000404100 426 ntBASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AL359643.1-201ENST00000404109 423 ntBASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AL139132.1-201ENST00000431587 344 ntBASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AC010374.2-201ENST00000512933 535 ntBASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AL512310.1-201ENST00000548639 172 ntBASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AC023161.2-201ENST00000551218 780 ntBASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 AL365361.1-201ENST00000566942 3481 ntBASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 Z95327.2-201ENST00000414579 1873 ntBASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RIMBP3Q9UFD9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 Y_RNA.238-201ENST00000364441 102 ntBASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 MIR887-201ENST00000401258 79 ntBASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 NUP35P1-201ENST00000422734 947 ntBASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 ATP5HP2-201ENST00000433885 485 ntBASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 AL136097.1-201ENST00000456945 913 ntBASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 AC018442.3-201ENST00000523025 183 ntBASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 AC009852.2-201ENST00000567898 485 ntBASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 AC231759.1-201ENST00000616455 597 ntBASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RIMBP3Q9UFD9 ASNSP3-201ENST00000451989 1306 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 AC067945.1-201ENST00000342609 618 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 RNA5SP197-201ENST00000363357 119 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 RPL6P21-201ENST00000418672 846 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 AC100770.1-201ENST00000532310 322 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 AC008759.1-201ENST00000589783 983 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 AC124856.1-201ENST00000600819 896 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 AC097505.1-201ENST00000610199 565 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 AC095038.2-201ENST00000621464 1070 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 AL672167.1-205ENST00000641112 3080 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 SMG1P4-204ENST00000523028 4131 ntBASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
RIMBP3Q9UFD9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 NCOA4P2-201ENST00000340589 1813 ntBASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 RN7SKP53-201ENST00000411337 315 ntBASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 RPL7P38-201ENST00000488396 739 ntBASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 RNVU1-4-201ENST00000612985 164 ntBASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.58□□□□□ -1.52
RIMBP3Q9UFD9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms