Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RPS20P1-201ENST00000434853 354 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 MTND4P15-201ENST00000437913 1033 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 CBX1P4-201ENST00000439415 457 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 MED6P1-201ENST00000439659 713 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC091959.2-201ENST00000477363 321 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 RN7SL132P-201ENST00000478131 296 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 RPS4XP15-201ENST00000489210 795 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC146944.2-203ENST00000502493 354 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 GTF2H2B-203ENST00000508065 1432 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 PPBPP1-201ENST00000510807 373 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC139495.1-202ENST00000513164 354 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 SNORA31.13-201ENST00000516624 135 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 SMARCE1P4-201ENST00000523647 241 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 OR8K2P-201ENST00000524645 927 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AP003168.1-201ENST00000530091 307 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC025918.2-201ENST00000558683 763 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC007599.1-201ENST00000568688 1174 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC079171.1-201ENST00000568788 914 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC007423.1-201ENST00000605009 627 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 KATNBL1P5-201ENST00000605015 517 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC243654.2-201ENST00000612843 443 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC034229.5-201ENST00000624258 185 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC008785.1-201ENST00000624475 456 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC016588.2-201ENST00000632484 3021 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 LINC02471-203ENST00000641941 4752 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC011155.1-201ENST00000316512 456 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 RNU6-213P-201ENST00000384051 104 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 MIR142-201ENST00000384835 87 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 RN7SKP27-201ENST00000410684 333 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 RNA5SP104-201ENST00000410989 118 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 CYCSP19-201ENST00000411715 316 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 TATDN1P1-201ENST00000414123 891 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 XKRYP4-201ENST00000414395 483 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 TCEA1P4-201ENST00000415066 844 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 LINC01881-201ENST00000416103 412 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 HMGB3P5-201ENST00000428894 612 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 DYNLL1P7-201ENST00000429273 258 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 PTP4A1P3-201ENST00000433661 420 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 RRM2P4-201ENST00000441721 562 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC239367.2-201ENST00000447309 705 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 XKRYP5-201ENST00000449659 483 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC108729.2-201ENST00000476543 840 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 RN7SL271P-201ENST00000487601 295 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC111193.1-201ENST00000504097 155 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC020593.1-201ENST00000507399 299 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 MTND2P31-201ENST00000512602 616 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 MTND4LP31-201ENST00000514859 294 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 MED28P5-201ENST00000528254 438 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 YPEL5P3-201ENST00000547227 352 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 HMGB3P26-201ENST00000560051 582 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC022968.1-201ENST00000567372 442 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 CYP4A43P-201ENST00000568156 121 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC034105.4-201ENST00000568304 277 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 AC005255.1-201ENST00000593748 216 ntBASIC3.56□□□□□ -1.84
CLCF1Q9UBD9 ZNF92P3-201ENST00000596594 954 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms