Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 PFN1P6-201ENST00000476786 399 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 RPL21P6-201ENST00000479171 504 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RPL38P3-201ENST00000484463 213 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 NIPA2P2-201ENST00000496376 1083 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 IGLVIV-64-201ENST00000518581 301 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 HSPE1P3-201ENST00000559254 309 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC017100.2-201ENST00000584628 355 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC090527.3-201ENST00000619041 548 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC002550.2-201ENST00000621246 394 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 SNORA17.5-201ENST00000630429 132 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AC130304.1-201ENST00000622942 2385 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AL645937.1-201ENST00000641739 1652 ntBASIC6.36□□□□□ -1.39
CNTN3Q9P232 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTN3Q9P232 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CNTN3Q9P232 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AP000473.2-201ENST00000602659 1537 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 FRG1BP-201ENST00000278882 761 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 OR52B1P-201ENST00000316506 909 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 FRG1CP-201ENST00000358464 769 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 RNU6-289P-201ENST00000364093 107 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 RN7SKP78-201ENST00000364711 318 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 GNG5P2-201ENST00000372054 207 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 RNU1-39P-201ENST00000383897 165 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 RNU6-657P-201ENST00000383904 107 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AL359704.1-201ENST00000411586 781 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 SNRPFP1-201ENST00000414761 252 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 DYNLL1P7-201ENST00000429273 258 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 TAAR7P-201ENST00000436141 242 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 ACTR3P2-201ENST00000439585 1257 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 HMGB1P4-201ENST00000455362 567 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 RN7SL273P-201ENST00000481561 299 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 UBA52P3-201ENST00000491303 382 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AC034159.1-201ENST00000513885 583 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 Vault.3-201ENST00000516676 95 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 AP003080.1-202ENST00000526526 915 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 AC022690.1-201ENST00000526681 550 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 PHBP17-201ENST00000528576 541 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AP003072.1-201ENST00000531740 145 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AL121821.2-201ENST00000556081 394 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 SUB1P2-201ENST00000556401 297 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 SULT1C2P1-202ENST00000562418 459 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 SULT1C2P2-201ENST00000562517 294 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 RMST_3.1-201ENST00000611651 109 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTN3Q9P232 AP000432.2-201ENST00000624164 2048 ntBASIC6.35□□□□□ -1.39
CNTN3Q9P232 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNTN3Q9P232 NMD3P1-201ENST00000439704 1488 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms