Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PCDHB16Q9NRJ7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB16Q9NRJ7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHB16Q9NRJ7 MTCO1P24-201ENST00000515438 1558 ntBASIC4.35□□□□□ -1.71
PCDHB16Q9NRJ7 AC012020.1-201ENST00000624541 1728 ntBASIC4.35□□□□□ -1.71
PCDHB16Q9NRJ7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 TAS2R15P-201ENST00000390674 928 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 U3.25-201ENST00000391209 220 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 MIR1182-201ENST00000408363 97 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 RNU2-28P-201ENST00000410457 189 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC068533.2-201ENST00000411872 306 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL390774.1-201ENST00000411924 246 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 MTND2P16-201ENST00000419987 799 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC062016.2-201ENST00000420950 676 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 EIF4EP1-201ENST00000422311 642 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL139421.1-201ENST00000423010 169 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 FABP7P2-201ENST00000429946 379 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 RPL29P29-201ENST00000448725 423 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 RN7SL184P-201ENST00000488308 297 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 RPL7P38-201ENST00000488396 739 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 DEFB109F-201ENST00000491870 277 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC104090.1-201ENST00000506341 1171 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 OR8L1P-201ENST00000534005 955 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC009712.1-201ENST00000564938 316 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC087783.2-201ENST00000605070 562 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL592221.1-201ENST00000605266 382 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 RNA5SP108-201ENST00000605921 117 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC080013.3-201ENST00000606839 578 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 AL390862.1-201ENST00000635467 1469 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 PABPC1P7-201ENST00000413177 1513 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 IQCB2P-201ENST00000401788 1633 ntBASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB16Q9NRJ7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.34□□□□□ -1.72
PCDHB16Q9NRJ7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
PCDHB16Q9NRJ7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 AC074029.4-201ENST00000624796 1859 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 AL359922.3-201ENST00000624779 1670 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 RNU6-984P-201ENST00000363236 109 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 RNU6-157P-201ENST00000383957 107 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 Y_RNA.408-201ENST00000383987 102 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 SNORA51.6-201ENST00000384151 125 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 NPM1P4-201ENST00000414095 812 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 AL008987.1-201ENST00000415528 237 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 TIMM9P2-201ENST00000419324 266 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 OFD1P18Y-201ENST00000420889 959 ntBASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB16Q9NRJ7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms