Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 THAP12P4-201ENST00000528321 2266 ntBASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NECTIN3Q9NQS3 ZNF37BP-203ENST00000452306 1352 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RNA5SP305-201ENST00000362665 119 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RNU6-216P-201ENST00000363282 104 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RNU6-931P-201ENST00000363850 107 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 SNORA4.1-201ENST00000364263 144 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RNA5SP455-201ENST00000365190 119 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RNU6-1200P-201ENST00000384162 107 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL645927.1-201ENST00000396783 406 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 MIR1284-201ENST00000408337 120 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 P2RY10P2-201ENST00000416730 913 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 SDCBPP2-201ENST00000424643 885 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL138785.1-201ENST00000425821 331 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC009238.2-201ENST00000431026 355 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 BX323845.1-201ENST00000432417 179 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RPL34P20-201ENST00000442771 351 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC092647.3-201ENST00000443044 633 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL589765.3-201ENST00000446084 462 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RPL23AP35-201ENST00000451906 501 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RN7SL443P-201ENST00000464331 290 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC090686.1-201ENST00000481577 749 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC093270.2-201ENST00000486157 792 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 HMGN2P25-201ENST00000486956 268 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RPL7P38-201ENST00000488396 739 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC073073.1-201ENST00000493920 463 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 Y_RNA.688-201ENST00000516565 95 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 RN7SKP147-201ENST00000517154 244 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AP000790.1-201ENST00000528891 737 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 CYCSP28-201ENST00000534284 321 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC124068.1-201ENST00000563131 678 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 ISCA1P3-201ENST00000577104 373 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC013444.2-201ENST00000603317 787 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 Z94722.1-201ENST00000604328 474 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AP001521.1-201ENST00000609150 300 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL627230.1-201ENST00000613077 211 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL591926.8-201ENST00000616876 211 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AP002799.1-201ENST00000623552 423 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC026422.1-201ENST00000623961 452 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL596275.2-204ENST00000641628 552 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL596275.2-206ENST00000641957 626 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL390862.1-201ENST00000635467 1469 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 HSPA8P18-201ENST00000439846 1928 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 ASNSP1-201ENST00000518311 1939 ntBASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NECTIN3Q9NQS3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 SNORA2.3-201ENST00000383920 135 ntBASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 RNU5A-2P-201ENST00000384337 116 ntBASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 MIR506-201ENST00000384998 124 ntBASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 SNRPEP2-201ENST00000397592 279 ntBASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 AL365338.1-201ENST00000422282 858 ntBASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 DDX39BP1-205ENST00000422507 192 ntBASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 AL365203.2-201ENST00000423444 196 ntBASIC4.78□□□□□ -1.64
NECTIN3Q9NQS3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms