Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AP000893.1-201ENST00000474462 794 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC016687.1-201ENST00000482574 353 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 RN7SL691P-201ENST00000494487 301 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 FTH1P21-201ENST00000512179 511 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC016550.3-201ENST00000515706 767 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC084757.1-201ENST00000559987 490 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC007599.1-201ENST00000568688 1174 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC107982.3-201ENST00000584957 985 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC011471.1-201ENST00000585766 187 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC083899.3-201ENST00000603413 594 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AL049634.3-201ENST00000604968 457 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AL592436.1-201ENST00000605135 558 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AL451086.1-201ENST00000605596 223 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC019176.2-201ENST00000611579 315 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC140479.6-201ENST00000633535 357 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 MFSD8-242ENST00000641690 4199 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM4Q9C037 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4□□□□□ -1.77
TRIM4Q9C037 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM4Q9C037 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
TRIM4Q9C037 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM4Q9C037 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM4Q9C037 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM4Q9C037 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM4Q9C037 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM4Q9C037 HMGN2P8-201ENST00000391458 268 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 MTCO3P31-201ENST00000405526 789 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4□□□□□ -1.77
TRIM4Q9C037 AL590806.1-201ENST00000415818 853 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 AL161631.1-201ENST00000417933 486 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 KRR1P1-201ENST00000419430 803 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4□□□□□ -1.77
TRIM4Q9C037 RBMY1KP-201ENST00000423480 476 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4□□□□□ -1.77
TRIM4Q9C037 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4□□□□□ -1.77
TRIM4Q9C037 HMGB3P10-201ENST00000434734 572 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4□□□□□ -1.77
TRIM4Q9C037 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4□□□□□ -1.77
TRIM4Q9C037 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4□□□□□ -1.77
TRIM4Q9C037 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4□□□□□ -1.77
TRIM4Q9C037 TXNP1-201ENST00000441872 371 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4□□□□□ -1.77
TRIM4Q9C037 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4□□□□□ -1.77
TRIM4Q9C037 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4□□□□□ -1.77
TRIM4Q9C037 AC004801.2-202ENST00000463559 283 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 AC007688.1-201ENST00000475592 759 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 TRAV31-201ENST00000502780 342 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4□□□□□ -1.77
TRIM4Q9C037 CCNG2P1-201ENST00000549521 1000 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4□□□□□ -1.77
TRIM4Q9C037 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4□□□□□ -1.77
TRIM4Q9C037 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4□□□□□ -1.77
TRIM4Q9C037 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4□□□□□ -1.77
TRIM4Q9C037 AL606490.9-201ENST00000603331 271 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 SNORA51-201ENST00000606420 132 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 AL135786.2-201ENST00000608422 615 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 AC090912.3-201ENST00000609775 533 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4□□□□□ -1.77
TRIM4Q9C037 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM4Q9C037 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM4Q9C037 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM4Q9C037 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC010329.2-201ENST00000595195 2737 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC127526.1-201ENST00000417526 366 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 MFSD13B-201ENST00000420133 1290 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 AL049610.1-201ENST00000423374 372 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 MRPL50P1-201ENST00000431951 384 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 ATP5HP2-201ENST00000433885 485 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC083863.1-201ENST00000438811 231 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 HMGB3P8-201ENST00000449709 577 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 RPL35P6-201ENST00000490024 372 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 AL121839.1-201ENST00000556233 1185 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC106782.4-201ENST00000568264 210 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC099489.2-201ENST00000574976 260 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 AL121772.2-201ENST00000614331 297 ntBASIC3.99□□□□□ -1.77
TRIM4Q9C037 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRIM4Q9C037 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms