Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL391261.4-201ENST00000616012 481 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 AC007342.8-201ENST00000623278 678 ntBASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.52□□□□□ -1.69
UPF3BQ9BZI7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC073073.2-201ENST00000609827 2578 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 RPS3AP25-201ENST00000411660 793 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC093578.1-201ENST00000415219 368 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC099336.2-201ENST00000422457 254 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 RWDD4P2-201ENST00000426392 563 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC098824.1-201ENST00000453565 980 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC099560.2-201ENST00000457554 255 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 GAPDHP36-201ENST00000480688 918 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 RWDD4P1-201ENST00000488019 565 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 CAB39P1-201ENST00000502277 460 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC005798.1-201ENST00000513715 387 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC016550.3-201ENST00000515706 767 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 SCARNA14-201ENST00000516903 136 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC025423.2-201ENST00000537570 439 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC005255.1-201ENST00000593748 216 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 OR6R2P-201ENST00000609216 300 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC067852.7-201ENST00000623270 535 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AC008725.1-201ENST00000605123 2263 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 AL031985.3-201ENST00000565390 2449 ntBASIC4.51□□□□□ -1.69
UPF3BQ9BZI7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 OR5AW1P-201ENST00000426334 1006 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 RPS6P12-201ENST00000432491 726 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 SNORA59A-201ENST00000459326 152 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AC105918.1-201ENST00000474399 838 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AC026427.2-201ENST00000506228 536 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 VN1R81P-201ENST00000602085 372 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 SNORA62.6-201ENST00000606322 83 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AF001550.2-201ENST00000636643 217 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 AC092079.1-201ENST00000558620 1985 ntBASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPF3BQ9BZI7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 RNA5SP97-201ENST00000365006 84 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 RNU6-213P-201ENST00000384051 104 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 U1.1-201ENST00000384101 164 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 NDUFB1P1-201ENST00000435191 180 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 PDSS1P2-201ENST00000449397 678 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 AC243772.1-201ENST00000451620 410 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 AP002371.1-201ENST00000463604 433 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 AC092747.2-201ENST00000545069 983 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 AC068446.3-201ENST00000555285 382 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 AC234775.3-201ENST00000564612 656 ntBASIC4.49□□□□□ -1.69
UPF3BQ9BZI7 FP236240.3-201ENST00000623061 327 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms