Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC006946.1-201ENST00000429106 328 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 MOB1AP1-201ENST00000430903 535 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 MTCYBP14-201ENST00000457471 715 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 SEPT7P6-201ENST00000469999 1143 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC092045.1-201ENST00000495716 1231 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC108941.1-201ENST00000502853 530 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC008802.1-201ENST00000519121 791 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 OR4A12P-201ENST00000530847 918 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 MIR4429-201ENST00000580105 73 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AL133247.2-201ENST00000603236 482 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 BX322635.1-201ENST00000605804 496 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 RNU4-89P-201ENST00000607443 133 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC006213.5-201ENST00000619673 288 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 MIR6075-201ENST00000620782 95 ntBASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RSPO3Q9BXY4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 OR10AB1P-202ENST00000641219 1686 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AL122126.1-201ENST00000546905 1318 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AL359837.1-201ENST00000381357 287 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AL391417.1-201ENST00000404100 426 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 DHFRP5-201ENST00000406944 564 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 RNA5SP44-201ENST00000410446 133 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC098592.2-201ENST00000413158 265 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC019070.1-201ENST00000415008 1024 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 OR5AW1P-201ENST00000426334 1006 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 RPL7P28-201ENST00000437739 740 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 HMGB1P16-201ENST00000447155 540 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC017099.1-201ENST00000448261 1028 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 MTND2P3-201ENST00000452458 470 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC034236.1-201ENST00000469891 373 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 TRBV8-1-201ENST00000481590 279 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 OR52A4P-202ENST00000481634 799 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 SNORA67.7-201ENST00000516664 135 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 RNU4-18P-201ENST00000516751 149 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 MIR4716-201ENST00000579628 84 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC015911.5-201ENST00000587076 451 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC015726.1-201ENST00000602353 681 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 RNU1-30P-201ENST00000606575 163 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AL021368.1-201ENST00000607490 540 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 MIR6500-201ENST00000622700 86 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 FP236240.3-201ENST00000623061 327 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC112484.5-201ENST00000624189 228 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 AC009452.1-201ENST00000640823 606 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 MTCO1P14-201ENST00000441695 1559 ntBASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
RSPO3Q9BXY4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 CASC19-284ENST00000642142 1868 ntBASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RSPO3Q9BXY4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms