Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 NPM1P47-201ENST00000560843 856 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AC090877.1-201ENST00000561418 344 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 SRGNP1-201ENST00000603392 451 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 AL034408.1-202ENST00000636088 415 ntBASIC4.65□□□□□ -1.67
RPAP1Q9BWH6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AL031985.3-201ENST00000565390 2449 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 HMGN2P8-201ENST00000391458 268 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 SNORA3.3-201ENST00000408712 125 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 TCEA1P2-201ENST00000420496 906 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 HSPE1P22-201ENST00000456856 327 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 OR4A12P-201ENST00000530847 918 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AL049874.4-201ENST00000557593 255 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AC141257.3-201ENST00000572906 215 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AC012213.4-201ENST00000606457 354 ntBASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RPAP1Q9BWH6 AC074029.4-201ENST00000624796 1859 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 MIR3074-201ENST00000384885 81 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 RANP8-201ENST00000444720 713 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 RPL31P53-201ENST00000457065 348 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 RN7SL93P-201ENST00000463035 293 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 HMGN1P8-201ENST00000463578 288 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AC084198.1-201ENST00000477747 402 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AC018797.3-201ENST00000513388 1241 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 RNU6-319P-201ENST00000516025 108 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 SNORA74D-201ENST00000516404 141 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 MIR5187-201ENST00000583479 76 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AL133247.2-201ENST00000603236 482 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AL591424.2-201ENST00000617023 128 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AL590410.1-201ENST00000617925 333 ntBASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RPAP1Q9BWH6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 SOD2P1-201ENST00000396543 562 ntBASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 SNORA11.2-201ENST00000408318 127 ntBASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC018635.1-201ENST00000468292 1030 ntBASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC110768.1-201ENST00000509222 400 ntBASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AP001542.1-201ENST00000591314 200 ntBASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AL160281.1-201ENST00000605307 311 ntBASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 AC096577.2-201ENST00000611455 153 ntBASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RPAP1Q9BWH6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 NCAPGP1-201ENST00000505112 1814 ntBASIC4.61□□□□□ -1.67
RPAP1Q9BWH6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms