Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.15□□□□□ -1.74
CCM2Q9BSQ5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCM2Q9BSQ5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCM2Q9BSQ5 FAM3C2-201ENST00000312214 681 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 RNU6-354P-201ENST00000383862 107 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 RNU6-610P-201ENST00000384264 107 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AL161909.1-201ENST00000397390 712 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 RN7SKP182-201ENST00000410772 298 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 BTF3P10-201ENST00000433415 495 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC092045.1-201ENST00000495716 1231 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC099522.1-202ENST00000514718 367 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 RNA5SP154-201ENST00000516193 111 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC069240.1-201ENST00000548774 375 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 PARP1P2-201ENST00000556806 195 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC011477.5-201ENST00000586571 259 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC115085.1-201ENST00000588924 229 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC125494.3-201ENST00000602759 455 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 BNIP3P31-201ENST00000604515 566 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 OR2BH1P-201ENST00000608850 864 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC083809.1-201ENST00000615051 472 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC024595.1-201ENST00000623088 387 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC000123.2-201ENST00000623124 461 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 AC016588.2-201ENST00000632484 3021 ntBASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCM2Q9BSQ5 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 Z82217.1-201ENST00000625157 8149 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 MIR448-201ENST00000362131 111 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AL049693.1-201ENST00000402760 611 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC073310.1-201ENST00000423226 1033 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC234779.1-201ENST00000425910 285 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 COX6B1P7-201ENST00000430845 235 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 HLA-N-201ENST00000437516 135 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 RPL23AP89-201ENST00000439324 255 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC104306.1-201ENST00000449702 371 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AL096803.2-201ENST00000450032 677 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 MTND6P6-201ENST00000478031 263 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC112198.4-201ENST00000515450 351 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 HMGB1P23-201ENST00000518743 568 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC105233.3-201ENST00000531125 744 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 RFPL1S-203ENST00000539579 330 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 CBX3P5-201ENST00000552017 521 ntBASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.14□□□□□ -1.75
CCM2Q9BSQ5 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms