Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 FTH1P2-201ENST00000466086 412 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC091959.2-201ENST00000477363 321 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 RN7SL132P-201ENST00000478131 296 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 MTND4LP31-201ENST00000514859 294 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC093014.1-201ENST00000548926 724 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 BMS1P7-201ENST00000602440 1052 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 BNIP3P31-201ENST00000604515 566 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AL096803.3-201ENST00000609032 532 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC110792.4-201ENST00000609843 298 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 AC022306.3-201ENST00000619930 550 ntBASIC5.45□□□□□ -1.54
SIN3AQ96ST3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.45□□□□□ -1.54
SIN3AQ96ST3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AC011503.2-201ENST00000594230 1500 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 ASNSP1-204ENST00000641977 1664 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 RAB9AP3-201ENST00000412737 573 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 SEC63P1-201ENST00000425785 1258 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 HMGB3P5-201ENST00000428894 612 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 ATP5HP2-201ENST00000433885 485 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 NOTCH2P1-201ENST00000443481 624 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 YWHAQP9-201ENST00000445891 512 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 RAB9AP1-201ENST00000449393 573 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 MTCO2P9-201ENST00000503214 694 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AC034244.2-201ENST00000514668 858 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 SUMO2P20-201ENST00000520803 283 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AC022882.1-201ENST00000532142 501 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AC093510.2-201ENST00000562820 896 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 AC010872.1-201ENST00000624225 675 ntBASIC5.44□□□□□ -1.54
SIN3AQ96ST3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SIN3AQ96ST3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC026523.2-201ENST00000625039 7739 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 RNU1-64P-201ENST00000365443 163 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC007066.1-201ENST00000392902 381 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 HSFY1P1-201ENST00000423928 1178 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 RRM2P4-201ENST00000441721 562 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC022034.3-201ENST00000471393 478 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC010342.1-201ENST00000514047 877 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 OSBPL9P3-201ENST00000534523 595 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AL391834.1-201ENST00000609609 560 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC090912.3-201ENST00000609775 533 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC005344.1-201ENST00000613391 459 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 MIR1264-201ENST00000616374 69 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC091905.1-201ENST00000624400 311 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 AC245100.2-201ENST00000454544 1679 ntBASIC5.43□□□□□ -1.54
SIN3AQ96ST3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIN3AQ96ST3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms