Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC009852.2-201ENST00000567898 485 ntBASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 AC091946.2-201ENST00000606105 291 ntBASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 AC126118.1-201ENST00000607744 628 ntBASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 AP001596.2-201ENST00000608410 312 ntBASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 AP004247.3-201ENST00000608682 624 ntBASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 AC015914.2-201ENST00000618167 288 ntBASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 AC005005.4-201ENST00000623789 16698 ntBASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.89□□□□□ -1.47
CHAMP1Q96JM3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC104623.2-202ENST00000623477 4002 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 IGKV7-3-201ENST00000357453 298 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 RNA5SP319-201ENST00000362768 119 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 RNU6-660P-201ENST00000364566 109 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 RNU6-1300P-201ENST00000391046 108 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 MTCO3P31-201ENST00000405526 789 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 NPM1P40-201ENST00000412758 733 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AL121878.1-201ENST00000418638 859 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC013429.2-201ENST00000418798 781 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 UBTFL3-201ENST00000418934 1024 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC104651.1-201ENST00000427559 735 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 VN1R54P-201ENST00000435210 1049 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 CYCSP12-201ENST00000437729 300 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC092809.1-201ENST00000441469 474 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 CYCSP24-201ENST00000445119 316 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC100832.1-201ENST00000471945 383 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 UBTFL6-201ENST00000477929 1024 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 RPL7P38-201ENST00000488396 739 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 RN7SL447P-201ENST00000494711 245 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC090071.1-201ENST00000507713 644 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC093281.2-201ENST00000510153 597 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC105031.1-201ENST00000518550 476 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 MIR4646-201ENST00000580775 63 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 BNIP3P30-201ENST00000601184 574 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC015871.5-202ENST00000623252 701 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AL356266.1-201ENST00000623311 483 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC145207.9-201ENST00000623802 325 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC025048.6-202ENST00000627667 438 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 CASC19-264ENST00000641912 1184 ntBASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CHAMP1Q96JM3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 RNU6-374P-201ENST00000364146 108 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 Y_RNA.302-201ENST00000364997 102 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 SNORA2.3-201ENST00000383920 135 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 AL589647.1-201ENST00000402485 466 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 ZNF603P-201ENST00000405613 487 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 RN7SKP33-201ENST00000410942 340 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 RPS7P13-201ENST00000413955 498 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 RPL30P16-201ENST00000419341 429 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.87□□□□□ -1.47
CHAMP1Q96JM3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms