Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 RN7SL860P-201ENST00000473738 223 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 UBE2CP3-201ENST00000502715 450 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 IGBP1P5-201ENST00000507524 1000 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC021146.7-201ENST00000509604 775 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC010285.3-201ENST00000511668 676 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 MTND5P21-201ENST00000531961 522 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 ZNF192P1-203ENST00000565888 810 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC141257.3-201ENST00000572906 215 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 KPNA2P3-201ENST00000584190 848 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC115085.1-201ENST00000588924 229 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC018754.1-201ENST00000607486 925 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC117490.2-201ENST00000610042 594 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AL391261.4-201ENST00000616012 481 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AC010608.2-201ENST00000624830 470 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 U6.98-201ENST00000637157 84 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 AL592494.2-201ENST00000425455 1548 ntBASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.78□□□□□ -1.8
CLHC1Q8NHS4 MTND4P10-201ENST00000446199 1363 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AP001148.1-201ENST00000624124 2359 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RNU6-356P-201ENST00000384140 107 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 OR6C69P-201ENST00000394268 893 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 ST13P16-201ENST00000401760 781 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 HSPE1P26-201ENST00000405341 275 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RPL18P10-201ENST00000425606 538 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 HIGD1AP4-201ENST00000430194 280 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AL356276.2-201ENST00000435919 558 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AF228730.2-201ENST00000438784 848 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 YWHAQP9-201ENST00000445891 512 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RPS17P13-201ENST00000448974 407 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RNU7-170P-201ENST00000459303 61 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RN7SL271P-201ENST00000487601 295 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AL132838.2-201ENST00000492041 314 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC110792.2-201ENST00000510278 224 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC005921.1-201ENST00000510589 286 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC092593.2-201ENST00000513866 913 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RNA5SP143-201ENST00000516936 115 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RN7SKP234-201ENST00000517173 224 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC025857.1-201ENST00000525252 377 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC023575.1-201ENST00000580510 358 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC112503.1-201ENST00000608436 391 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC239803.2-201ENST00000610161 430 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 NF1P10-201ENST00000613227 742 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AL445567.2-201ENST00000618935 498 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC019080.5-201ENST00000624891 757 ntBASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLHC1Q8NHS4 AC123912.3-201ENST00000600907 1367 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 RNU1-32P-201ENST00000363937 159 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 RNA5SP130-201ENST00000364431 114 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 PTMAP5-201ENST00000393073 333 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 RNU4-6P-201ENST00000410804 122 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 Y_RNA.625-201ENST00000411256 107 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 AC016397.1-201ENST00000412463 242 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 AC108032.1-201ENST00000416706 207 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 COX6CP15-201ENST00000426313 211 ntBASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.76□□□□□ -1.81
CLHC1Q8NHS4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms