Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 SNORD116.1-201ENST00000365628 92 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 MIR129-1-201ENST00000384972 72 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AL590762.2-201ENST00000395798 571 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 RNU6-603P-201ENST00000411403 107 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 COX6CP17-201ENST00000421389 185 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 RGS17P1-201ENST00000423358 553 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 RPEP3-201ENST00000425462 676 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 MTCO1P54-201ENST00000430139 712 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AL591623.2-201ENST00000449978 222 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC108751.2-201ENST00000469993 231 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC011979.1-201ENST00000472300 483 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC104689.1-201ENST00000473356 768 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC004263.1-201ENST00000479327 332 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 VPS26AP1-201ENST00000483197 979 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 RPL36AP41-201ENST00000493820 306 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 DYNLL1P6-201ENST00000503440 264 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 HIGD1AP6-201ENST00000521833 279 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 MTATP6P15-201ENST00000527233 835 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC009643.1-201ENST00000532030 391 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC069061.3-201ENST00000582254 823 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 VN1R78P-201ENST00000597393 564 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC091488.1-201ENST00000604239 660 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AL133338.2-201ENST00000604292 736 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC025811.1-201ENST00000604312 472 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC069545.1-201ENST00000605671 358 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 MIR6758-201ENST00000620653 63 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 U3.53-201ENST00000628922 216 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AL592148.3-201ENST00000608771 2646 ntBASIC4.31□□□□□ -1.72
BEST3Q8N1M1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BEST3Q8N1M1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 RPL32P3-201ENST00000359025 275 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 SNORA62-201ENST00000365493 153 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 Z98745.1-201ENST00000402553 494 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC107081.1-201ENST00000414975 361 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 P2RY10P2-201ENST00000416730 913 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 PAICSP7-201ENST00000419829 962 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC007435.1-201ENST00000421086 415 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 UQCRBP1-201ENST00000421129 336 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 RPS27AP7-201ENST00000422792 455 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 DPRXP1-201ENST00000426312 460 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 USP9YP22-201ENST00000438971 294 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC004865.1-201ENST00000442276 1003 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 RPS27AP15-201ENST00000447672 466 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AL162591.2-201ENST00000449634 317 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC104306.1-201ENST00000449702 371 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC108463.1-201ENST00000450258 347 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC090142.1-201ENST00000465776 462 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC104763.1-201ENST00000475274 360 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC013356.1-201ENST00000489027 564 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AP001781.1-201ENST00000530977 207 ntBASIC4.3□□□□□ -1.72
BEST3Q8N1M1 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.3□□□□□ -1.72
BEST3Q8N1M1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms