Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MIR3662-201ENST00000637030 95 ntBASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 MTND5P42-201ENST00000637720 498 ntBASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.51□□□□□ -1.53
TMEFF1Q8IYR6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AL451142.1-201ENST00000375867 775 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 RPL23AP17-201ENST00000401064 499 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 RNU4-55P-201ENST00000410731 137 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 ZNF90P2-204ENST00000419323 1075 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 RPS27AP14-201ENST00000422868 454 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 MTND2P23-201ENST00000422990 651 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AL356583.2-201ENST00000426536 280 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AP001324.1-201ENST00000428553 399 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 COX6CP18-201ENST00000448769 222 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 RN7SL385P-201ENST00000468873 276 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 BX284632.1-201ENST00000478218 541 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 HMGB1P29-201ENST00000505659 499 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC111000.3-201ENST00000508057 576 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 FGF7P4-201ENST00000509595 295 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 RNU6-416P-201ENST00000516265 103 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 RNU6-941P-201ENST00000516346 108 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 SNORA18.6-201ENST00000516792 115 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC078899.1-201ENST00000521432 1185 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 IGJP1-201ENST00000522682 475 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 ARL2BPP5-201ENST00000523141 481 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 HMGB1P40-201ENST00000525121 540 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 OR5AP1P-201ENST00000529730 940 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC008126.1-201ENST00000549019 480 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC010200.2-201ENST00000605098 235 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AL050343.2-201ENST00000607338 280 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 MLECP1-201ENST00000615893 709 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC079097.1-201ENST00000512187 1399 ntBASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.5□□□□□ -1.53
TMEFF1Q8IYR6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 HSPA8P18-201ENST00000439846 1928 ntBASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 RNU6-452P-201ENST00000384406 107 ntBASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 AL161909.1-201ENST00000397390 712 ntBASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 AL009179.1-201ENST00000406085 265 ntBASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.49□□□□□ -1.53
TMEFF1Q8IYR6 AC109780.2-201ENST00000413467 845 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms