Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL606490.8-201ENST00000441624 319 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 CEACAMP4-201ENST00000457676 421 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 RNU6-775P-201ENST00000459318 96 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC108064.1-201ENST00000513791 460 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 SNORA70.17-201ENST00000516449 133 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AL360157.1-201ENST00000565962 87 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC005255.1-201ENST00000593748 216 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 MTCO2P22-201ENST00000603246 681 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC022387.2-201ENST00000604050 448 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC103710.3-201ENST00000608157 948 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AC073530.2-201ENST00000623987 261 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 OR5AC4P-202ENST00000642086 985 ntBASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC65Q8IXS2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 HLFP1-201ENST00000402375 499 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC073464.3-201ENST00000422564 712 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 USP12PY-201ENST00000427677 1064 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 NPM1P34-201ENST00000428821 893 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 RPL21P89-201ENST00000444021 467 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 MTND2P25-201ENST00000449028 610 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC007537.2-201ENST00000472093 511 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 TPT1P3-201ENST00000492841 512 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 RPL7P47-201ENST00000497299 556 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC010342.1-201ENST00000514047 877 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 RNU6-491P-201ENST00000516099 110 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC090877.1-201ENST00000561418 344 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AL606490.9-201ENST00000603331 271 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 ZYXP1-201ENST00000617638 118 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 RNA5SP196-201ENST00000625967 102 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 FAM35DP-201ENST00000323387 2712 ntBASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC65Q8IXS2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 HSPA8P1-201ENST00000425843 1833 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 OR5AW1P-201ENST00000426334 1006 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC007563.3-201ENST00000433233 371 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AP001086.1-201ENST00000494882 321 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AGGF1P6-201ENST00000569213 976 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC141257.3-201ENST00000572906 215 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 AC245128.3-201ENST00000594721 748 ntBASIC4.28□□□□□ -1.72
CCDC65Q8IXS2 EIF1P6-201ENST00000600054 334 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms