Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 CEP170P1-201ENST00000502249 4587 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC017002.4-201ENST00000604721 1525 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC007685.1-201ENST00000329806 452 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 RN7SKP285-201ENST00000410137 318 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC010385.1-201ENST00000412374 256 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 RPS20P25-201ENST00000412447 352 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 RANP4-201ENST00000413361 655 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC073464.3-201ENST00000422564 712 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AL590623.1-201ENST00000427864 105 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 NPM1P34-201ENST00000428821 893 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 MTND2P21-201ENST00000436242 1042 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 NUTF2P3-201ENST00000448540 384 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 RPS11P1-201ENST00000451072 473 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 HMGB3P21-201ENST00000452483 547 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AL645939.1-201ENST00000453429 797 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 RPS23P1-201ENST00000491662 432 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 RPL7P24-201ENST00000493052 752 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC004069.2-201ENST00000505438 1114 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 MIR3939-201ENST00000582614 106 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AL445423.1-201ENST00000609941 536 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC020658.4-201ENST00000613987 684 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC009452.1-201ENST00000640823 606 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 CR381670.1-201ENST00000624291 1693 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC50Q8IVM0 AC006504.1-201ENST00000562493 3666 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 ASNSP1-204ENST00000641977 1664 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 SNORA56-201ENST00000383966 129 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 OR6C69P-201ENST00000394268 893 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 ATP5F1P4-201ENST00000397288 746 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 Z86062.1-201ENST00000406773 777 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 MTND4P11-201ENST00000417020 1058 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 COX6CP15-201ENST00000426313 211 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 MRPL50P1-201ENST00000431951 384 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 MTCO1P52-201ENST00000433928 531 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 RPL5P32-201ENST00000454085 879 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 RNU7-170P-201ENST00000459303 61 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 MTND6P6-201ENST00000478031 263 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 SNORD116-26-201ENST00000516006 96 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 SMARCE1P4-201ENST00000523647 241 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AP003730.1-201ENST00000524605 285 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 TOMM20P2-201ENST00000540082 421 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AC091516.1-201ENST00000549191 703 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AC099489.2-201ENST00000574976 260 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 CR589904.2-201ENST00000612533 440 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 MLECP1-201ENST00000615893 709 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AP004607.9-201ENST00000618202 316 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AC007342.8-201ENST00000623278 678 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 CFTRP2-201ENST00000634304 199 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 AP002001.2-201ENST00000529025 1469 ntBASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms