Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL117336.2-201ENST00000602435 335 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AL590282.1-201ENST00000610379 1136 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 MIR6863-201ENST00000636112 90 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC104162.1-201ENST00000430831 2382 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 Z95327.2-201ENST00000414579 1873 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 GNG5P1-201ENST00000255500 204 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 RN7SKP151-201ENST00000410230 316 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC012065.2-201ENST00000421295 375 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC007562.1-201ENST00000421819 517 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AL445669.1-201ENST00000426743 755 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC009961.2-201ENST00000435771 251 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 CBX1P1-201ENST00000440184 427 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 FAM103A2P-201ENST00000444122 354 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC023274.2-201ENST00000445264 521 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 MTCO3P20-201ENST00000454926 688 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC011225.1-201ENST00000457751 369 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC006539.1-201ENST00000481419 501 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC109462.1-201ENST00000491087 368 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 ARL4AP2-201ENST00000507378 601 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 Y_RNA.672-201ENST00000516289 104 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 NRBF2P4-201ENST00000520874 850 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 MIR1269B-201ENST00000580405 75 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC044792.1-201ENST00000593294 196 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AL122125.1-201ENST00000616999 600 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC018445.2-201ENST00000622987 260 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC010149.2-201ENST00000637608 315 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AL157700.1-201ENST00000561973 1432 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC008957.3-201ENST00000624112 2242 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC114546.3-201ENST00000623582 1734 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 AC022034.1-201ENST00000512867 2156 ntBASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.3□□□□□ -1.4
NPAS4Q8IUM7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC235565.1-201ENST00000456962 1325 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 SRRM1P3-201ENST00000426911 2678 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 SNORD8-201ENST00000363915 110 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 SNORA58B-201ENST00000364259 136 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 FGF7P8-201ENST00000402994 292 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 RNU4-34P-201ENST00000410431 124 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 PIGFP2-201ENST00000421400 651 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 RPEP2-201ENST00000432149 701 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 CEACAMP1-201ENST00000434624 1035 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 CYCSP12-201ENST00000437729 300 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 FABP5P2-201ENST00000439042 408 ntBASIC6.29□□□□□ -1.4
NPAS4Q8IUM7 MTCO3P18-201ENST00000440206 761 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms