Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 OR5J1P-201ENST00000313544 939 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 BX842559.1-201ENST00000419615 532 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 KCTD9P3-201ENST00000434597 1169 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC073522.1-201ENST00000483312 377 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 RPL7P38-201ENST00000488396 739 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC010374.2-201ENST00000512933 535 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 Y_RNA.238-201ENST00000364441 102 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 RNU1-140P-201ENST00000365040 165 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 HMGN1P24-201ENST00000412282 298 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 OR51A6P-201ENST00000418680 1004 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 HIGD1AP4-201ENST00000430194 280 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 RAB28P3-201ENST00000448325 597 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC026333.2-201ENST00000542164 106 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC090312.2-201ENST00000582687 378 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 IGHV3-29-201ENST00000604817 344 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 AC127502.3-201ENST00000636170 1206 ntBASIC2.42□□□□□ -2.02
CSMD3Q7Z407 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CSMD3Q7Z407 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 RNU1-70P-201ENST00000362618 164 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 RNA5SP235-201ENST00000365411 114 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AL031679.1-201ENST00000400616 525 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 U3.39-201ENST00000408569 239 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC018442.3-201ENST00000523025 183 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 GTF3AP2-201ENST00000557014 266 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC010149.2-201ENST00000637608 315 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 RNU1-15P-201ENST00000353977 144 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 IL6-203ENST00000401651 539 ntTSL 2 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC105272.1-201ENST00000438604 198 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC091826.1-201ENST00000514065 313 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AL121594.4-201ENST00000556211 1196 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC100793.4-201ENST00000613683 429 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 A2MP1-204ENST00000566278 4130 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 AC124312.4-201ENST00000605533 310 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 MIR7843-201ENST00000622274 79 ntBASIC2.41□□□□□ -2.02
CSMD3Q7Z407 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CSMD3Q7Z407 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
CSMD3Q7Z407 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms