Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RPL31P20-201ENST00000449593 360 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AL133477.1-201ENST00000457472 514 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC146944.2-203ENST00000502493 354 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 ATG10-AS1-201ENST00000504846 648 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC139495.1-202ENST00000513164 354 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC007991.1-201ENST00000522680 631 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 TOMM20P2-201ENST00000540082 421 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 HSPE1P5-201ENST00000561489 272 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 MTCO2P22-201ENST00000603246 681 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC024941.1-201ENST00000612250 334 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 RPL23AP61-201ENST00000623642 466 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 AC024560.2-201ENST00000507981 1497 ntBASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.96□□□□□ -1.78
PTPN20Q4JDL3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 RNU1-18P-201ENST00000363062 164 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 HSPE1P8-201ENST00000406997 288 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 MIR1193-201ENST00000408109 78 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AL591419.1-201ENST00000427423 339 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 MTCO1P45-201ENST00000431457 267 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 RPS20P21-201ENST00000466859 343 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 MIR5685-201ENST00000579080 79 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AC022884.3-201ENST00000579571 248 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 ABI1P1-201ENST00000603375 1120 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AC007423.1-201ENST00000605009 627 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 RNU1-30P-201ENST00000606575 163 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AL391834.1-201ENST00000609609 560 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 AC005344.1-201ENST00000613391 459 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 LINC00561-201ENST00000565815 2738 ntBASIC3.95□□□□□ -1.78
PTPN20Q4JDL3 SPATA2P1-201ENST00000431223 2055 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AP004289.2-201ENST00000444413 1457 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 OR4A15-201ENST00000314706 1035 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 RNU6-386P-201ENST00000362650 107 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 RPL7P60-201ENST00000397636 735 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 ZNF603P-201ENST00000405613 487 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 RNU6-564P-201ENST00000410983 104 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AC009965.2-201ENST00000425328 970 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 UBE2V2P3-201ENST00000433562 437 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 BUD31P2-201ENST00000449374 300 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 NANOGP10-201ENST00000453325 895 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 RPL5P13-201ENST00000462840 709 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 RN7SL93P-201ENST00000463035 293 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 NPM1P41-201ENST00000512920 831 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AC018797.3-201ENST00000513388 1241 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AC092747.2-201ENST00000545069 983 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AL133457.1-201ENST00000564251 987 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 MIR4512-201ENST00000583257 77 ntBASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.94□□□□□ -1.78
PTPN20Q4JDL3 HMGB1P50-201ENST00000605814 607 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms